Yearly Archives: 2016

K = 14 admixture analysis of Lapita genomes

Below is a plot for a K = 14 admixture analysis that includes four genomes from the Lapita culture on the islands of Vanuatu and Tonga in the South Pacific. The table above the plot gives some information for these

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Phenotype SNPs from the Lapita culture

Below are derived allele counts and total numbers of reads for SNPs that have a large effect on phenotype for genomes from the Lapita culture on the islands of Vanuatu and Tonga in the South Pacific. Nonzero derived allele counts

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K = 13 admixture analysis of genomes from Neolithic central Asia Minor

Below is a plot for a K = 13 admixture analysis that includes nine Neolithic genomes from central Asia Minor. The table above the plot gives some information for these samples. The Pre-Pottery Neolithic samples are similar to the early

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Phenotype SNPs from Neolithic central Asia Minor

Below are derived allele counts and total numbers of reads for SNPs that have a large effect on phenotype for Neolithic genomes from central Asia Minor. Nonzero derived allele counts are in bold. Note that small derived allele counts may

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Y-SNP calls from Neolithic central Asia Minor

In the table below are links to Y-SNP calls for Neolithic samples from central Asia Minor. Sample Period Date BC Haplogroup Bon004 Pre-Pottery Neolithic > 8300 G2a2b2b-F705 calls Bon001 Pre-Pottery Neolithic 8212–7952 G2a2b2b1a-PF3422 calls Tep001 Pottery Neolithic 7500–5800 G, J2,

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K = 11 admixture analysis of Amerindians and Eskimos

At the bottom of this post is a plot for a K = 11 admixture analysis of Old World populations. Above it is a plot of the results of projecting Amerindian, Eskimo, and some Eastern Siberian populations onto the components

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Phenotype SNPs from the ancient Americas

Below are derived allele counts and total numbers of reads for SNPs that have a large effect on phenotype for ancient DNA samples from the Americas. Nonzero derived allele counts are in bold. Note that small derived allele counts may

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K = 13 admixture analysis of ancient Iranian genomes

Below is a plot for a K = 13 admixture analysis that includes five new ancient genomes from the Zagros Mountains of Iran. The following table gives some information for these samples. Sample Period Date BC AH1 Early Neolithic Unknown

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Phenotype SNPs from ancient Iran

Below are derived allele counts and total numbers of reads for SNPs that have a large effect on phenotype for five new ancient genomes from the Zagros Mountains of Iran. Nonzero derived allele counts are in bold. Note that small

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Y-SNP calls from ancient Iran

In the table below are links to Y-SNP calls for ancient DNA samples from the Zagros Mountains of Iran. Sample Period Date BC Haplogroup AH2 Early Neolithic 8205–7756 J2b-M12* calls WC1 Early Neolithic 7455–7082 G2b2a-Z8022 calls F38 Early Iron Age

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