In the table below are links to Y-SNP calls for samples from the ancient Near East.
Sample Region Culture Haplogroup I1632 Armenia Copper Age L1a1-M27* calls I1635 Armenia Kura-Araxes R1b1a1b-CTS3187 calls I1293 Iran Mesolithic J2a-CTS1085 calls I1945 Iran Neolithic R2a-Y3399 calls I1949 Iran Neolithic pre-R2-M479 calls I1671 Iran Neolithic G2a1a-FGC602(xG2a1a1) calls I1662 Iran Copper Age J2a-PF5008(xL581) calls I1674 Iran Copper Age G1a1b-GG372 calls I0861 Levant Natufian E1b1b1b2-CTS11781* calls I1069 Levant Natufian E1b1b1-PF1871(xE1b1b1b1) calls I1072 Levant Natufian E1b1b1b2-CTS8182* calls I1685 Levant Natufian E1b1b-CTS10365 calls I1690 Levant Natufian E1b1b-CTS4345 calls I1414 Levant PPNB E1b1b1b2-CTS11781 calls I1415 Levant PPNB E1b1b1b2a1-Y4974 calls I1416 Levant PPNB CT(xH, I, J, K) calls I1707 Levant PPNB T1-PF5610(xT1a1, T1a2) calls I1710 Levant PPNB E1b1b1a1-CTS675 calls I1727 Levant PPNB F(xG, J, LT, K2) calls I1700 Levant PPNC H2-P96 calls I1705 Levant Bronze Age J1a2b-Z2324 calls I1730 Levant Bronze Age J2b1-PF7314 calls
There is also sample i1635 from EBA Armenia Kalavan which belongs to Kura-Araxes culture. In paper has not any dna given, but according Lazaridis tweet is r1b1-m415xm269. Can you look at them y calls?
It’s R1b1a-A702(xV88, P297).
And what about hotu cave j sample,Iran chalcolithic J sample and bronze age levant samples?
Done.
Thanks for these
Thanks for this! Finally the Out of India/Middle-East IE can be put to rest without question.
So that R1b had P297?
In my thesis there is a supplement called precisely ….
EXODUS TO IBERIA – Plight of the P297 mutating to M269?
http://blogs.sapo.pt/cloud/file/eb6b52b82097d41dfa0e5797a2fa7945/olympusmons/2016/From%20Shulaveri%20to%20Bell%20beaker.pdf
Will I be that lucky (right)?
Upps, did not see the X… ooohhh. so not such a clear shot.
Thanks for your work! I have some questions regarding I1730 sample from BA Levant: J2b-L282(xJ2b2). Is there a reason why this sample is tested for only one M205-level marker? Also, it is positive for one of M241-level markers, yet the designation is xJ2b2, was it a false positive or something else?
Can you show us rest y snp calls also from Natufian, PPNB and Chalcolithic Armenia?
I reviewed the y-chromosome of I1707 and there is not found “PF7466” position: 13904842 within the y-chromosome. Positive SNPs only give IJK for this sample and anyway is negative for all known main T subclades.
No, it’s positive for PF7466, and it’s also T1. A link to the calls is above.
I think you have wrongly reported Y9189. You can take a look here: https://www.yfull.com/tree/T-Y8614/
Y9189 is T1a3a and not T-L206-Y11151-Y8614-FGC1439/Y9189 as you posted
Ok. I see you are right. This is the main T1a3 branch.
Well, I will try why I could not find this positives. This is strange, since I downloaded the genome correctly.
I downloaded the file directly from EBI. converted the BAM file with the latest version of Felix tool. Why do you think Im not finding these positive inside the files?
I can’t find these positives with the Felix Tool but I have found using IGV.
I1671 please :=)
Up now.
please,do also some armenian chalcolithic L1a sample.
[…] Among the other ancient samples, the ancient Egyptian samples are most similar to the Bronze Age samples from Jordan in the Levant. Note that the Pre-Ptolemaic samples JK2134 and JK2911 belong to the same J1a2a2-Z2324 and J2b1-PF7314 Y haplogroups that the Bronze Age Levant samples I1705 and I1730 belong to. […]
[…] components. Note that the 1500 AD Kenya sample belongs to the Caucasoid Y haplogroup E1b1b, as the Natufians did. The amount of the Natufian-related autosomal component in African populations correlates very well […]