Yearly Archives: 2017

K = 14 admixture analysis of ancient Egyptian genomes

At the bottom of this post is a plot for a K = 14 admixture analysis that includes three genomes from ancient Egypt. The table above the plot gives some information for these samples. The brown and black Negroid components

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Phenotype SNPs from ancient Egypt

Below are derived allele counts and total numbers of reads for SNPs that have a large effect on phenotype for genomes from ancient Egypt. Nonzero derived allele counts are in bold. Note that small derived allele counts may be due

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Y-SNP calls from ancient Egypt

In the table below are links to Y-SNP calls for samples from ancient Egypt. Sample Period Date BC Haplogroup JK2134 Pre-Ptolemaic 776–569 J1a2a2-Z2329 calls JK2911 Pre-Ptolemaic 769–560 J2b1-PF7314 calls JK2888 Ptolemaic 97–2 E1b1b1a1b2-V22 calls

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Chinchorro DNA paper published on bioRxiv

I’ve written a paper on my discovery of European admixture in a Chinchorro mummy DNA sample, and it’s now published on bioRxiv: European admixture in Chinchorro DNA

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K = 14 admixture analysis of Neolithic Estonian genomes

Below is a plot for a K = 14 admixture analysis that includes seven genomes from Neolithic Estonia. The table above the plot gives some information for these samples. The hunter-gatherer samples from the Comb Ware culture are similar to

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Phenotype SNPs from Neolithic Estonia

Below are derived allele counts and total numbers of reads for SNPs that have a large effect on phenotype for genomes from Neolithic Estonia. Nonzero derived allele counts are in bold. Note that small derived allele counts may be due

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Y-SNP calls from Neolithic Estonia

In the table below are links to Y-SNP calls for samples from Neolithic Estonia. Sample Culture Date BC Haplogroup Kudruküla 3 Comb Ceramic 3950–1850 R1a1-YP1335 calls Ardu 1 Corded Ware 2850–2050 R1a1a1b-Z645 calls Ardu 2 Corded Ware 2921–2555 R1a1a1b1-Z283 calls

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