Y-SNP calls for Oase 1

Below are the Y-SNP calls for Oase 1, the 40,000-year-old sample from a cave in the Carpathian Mountains of southwestern Romania. Positive calls are in bold, and negative calls are in non-bold.

The calls show that Oase 1 belonged to Y haplogroup K.

A00-FGC25445/YP2522
A00-FGC26989/YP3266
A00-FGC25850/YP2766
A00-FGC27819/YP3680
A00-FGC26607/YP3053
A00-FGC25157/YP2401
A00-FGC26326/YP2905
A00-FGC25415/YP2503
A00-FGC25703/YP2673
A00-FGC26938/YP3244
A00-FGC27479/YP3540
A00-FGC25824/YP2750
A00-FGC25707/YP2674
A00-FGC26669/YP3085
A00-L1119
A00-L1157
A00-FGC26466/YP2980
A00-A2650/YP2688
A00-FGC25158/YP2402
A00-FGC27735/YP3631
A00-FGC27906/YP3728
A00-A2649/YP2687
A00-FGC25847/YP2765
A00-FGC27550/YP3576
A00-A2667/YP2779
A00-FGC25749/YP2703
A00-FGC27433/YP3519
A00-FGC25506/YP2550
A00-FGC25780/YP2728
A00-A2923/YP3542
A00-FGC25712/YP2676
A00-FGC25511/YP2554
A00-A3281/YP2681
A00-L1117
A00-L1141
A00-L1091
A00-FGC25989/YP2811
A00-FGC27389/YP3490
A00-L1095
A0-T-YP2191
A0-T-YP2189
A0-T-FGC25677/YP1816
A0-T-A2789/YP1958
A0-T-FGC26615/YP1967
A0-T-L1143
A0-T-FGC26674/YP1984
A0-T-A2852/YP2078
A0-T-L1155
A0-T-FGC25771/YP1835
A0-T-FGC26411/YP1926
A0-T-FGC25754/YP1834
A0-T-FGC26964/YP2044
A0-T-YP2158
A0-T-FGC26900/YP2033
A0-T-FGC25550/YP1786
A0-T-PF482
A0-Z9865/Y10214
A0-V177
A0-V149
A0-V190
A0-Z9458/Y9978
A0-Z8741/Y9580
A0-Z9030/Y9710
A0-Z9772/Y10154
A0-L993
A0-V239
A0-V225
A0-Z9058/Y9720
A0-Z9228/V3189
A0-Z8481/Y9462
A0-Z8709/Y9555
A0-Z9267/Y9845
A0-L1018
A0-V223
A0-V229
A0-Z8867/Y9660
A0-Z8558/Y9489
A0-V154
A0-Z9569/Y10036
A0-Z9310/Y9874
A0-Z8925/Y9694
A0-Z4958
A0-Z8792/Y9614
A0-PF1117
A0a1-L1082
A0a1-L1081
A0b-L1048
A0b-L1058
A0b-L1042
A0b-L1041
A1-V238
A1-YP3858
A1a-Z11211/Y8240
A1a-V14
A1a-Z10314/Y8015
A1a-Z10775/Y8113
A1a-Z10920/V3395
A1a-Z10804/Y14322
A1a-V191
A1a-Z10320/Y8017
A1a-Z10281/Y8007
A1a-Z11236/Y8250
A1a-Z10532/Y8042
A1a-Z10206/Y7988
A1a-Z10780/Y8116
A1a-P82
A1a-Z10670/V3079
A1a-Z10318/V2393
A1a-V63
A1a-Z10235/Y1045
A1a-PF1117
A1a-Y7944-Z11391/Y8026
A1b-Y8286
A1b1-M11783
A1b1-PF1117
A1b1a1-P5
A1b1a1-M276/P247
A1b1a1a-M6
A1b1a1a-M49/PAGE41/PAGES00041
A1b1a1a2-L963
A1b1a1a2b-P262
A1b1a1a1-P28
BT-V187/PF1403
BT-M8968/PF207
BT-M42
BT-V3904/M9282
BT-M8971
BT-M9226/PF869
BT-M9197
BT-PF1407/V21/M8969
BT-M9046/PF324
BT-M9357/PF1209
BT-V3297/M9255/PF925
BT-M9188
BT-M9193
BT-M9248
BT-M8972
BT-M9365/PF1218
BT-M9187
BT-M9326
BT-M9317
BT-M9189
BT-M9319
BT-M9128
BT-M9135
BT-M9083
BT-M9260
BT-L957
BT-M9094/PF671
BT-M9087
BT-Z17339/Y9393
BT-M9219/CTS7503
BT-M9075
BT-M9178
BT-M9172
BT-M9353
BT-M9221
B-V1406/M8701
B-M8633-Y1577-Z5553
B-M8633-Y1577-Z5678
B-M8633-Y1577-Z5501
B-M8633-Y1577-Z5397
B-M8633-Y1577-Z5416
B-M8633-Y1577-Z5509
B-M8633-Y1577-Z5529
B-M8633-Y1577-Z5610
B-M8633-Y1577-Z5472
B-M8633-Y1577-Z5685
B-M8633-Y1577-L1388
B-M8633-Y1577-L1389
B-M8633-Y1577-Z5405
B-M8633-Y1577-Z5638
B-M8633-Y1577-Z5849
B-M8633-Y1577-Z5092
B-M8633-Y1577-Z5404
B-M8633-Y1577-Z5717
B-M8633-Y1577-Z5222
B-M8633-Y1577-Z5390
B-M8633-Y1577-Z5413
B-M8633-Y1577-Z5514
B-M8633-Y1577-Z5744
B-M8633-Y1577-Z5741
B-M8633-Y1577-Z5607
B-M8633-Y1577-Z5364
B-M8633-Y1577-Z5349
B-M8633-Y1577-Z5735
B-M8633-Y1577-Z5667/Z5667.2
B2-CTS5599/M8783
B2-M8917
B2-CTS11323/M8913
B2-Z11879/Y10283
B2-CTS3186/M8752
B2-CTS2668/M8747
B2-Z11804/Y10275
B2-Z11748/Y10260
B2-Z11700/M8905
B2-Z11805/M8750
B2-M8753
B2-SK297/Y10268
B2-SK298/Y10267
B2-Y10278
B2-Z11762/V1529/M8707
B2-CTS9829/M8845
B2-Z11865/M8889
B2b1a-P7_1/P7
B2b1a-P7_2
B2b1a1b1-M108.1/M108.2/M108
B2b1a2-P8_2
B2b1a2-P8_3
B2a-Z22888/Y10346
B2a-V2202/M5873
B2a-M6464
B2a-CTS4358/M5923
B2a-M5938
B2a-V197/M6037
B2a-CTS4738/M5929
B2a-V2120/M6372
B2a-Z23028/Y12223
B2a-M5891
B2a-Z22988/Y12221
B2a-M6054
B2a-Z22966/Y10373
B2a-M6473
B2a-V1687/M6368
B2a-M6357
B2a-M5946
B2a-M5851
B2a-Z22968/Y10374
B2a-M6451
B2a-Z22945/Y10361
B2a-M6038
B2a-V1931/M5869
B2a-M6437
B2a-F1493/M6377
B2a-Y12200-Y12203-Y12208
CT-M5783
CT-L1480/V3908/M5766
CT-V1431/M5612
CT-M5809/PF1237
CT-V2824/M5671/CTS3662/PF704
CT-V3648/M5760/PF954
CT-M5786/PF1061
CT-M5601
CT-M5743/CTS8542
CT-V2175/M5632
CT-V1878/M5631/PF292
CT-M5746/CTS8709
CT-M5812
CT-Y1526
CT-Y1525
CT-Y1460
DE-CTS10714/PF1876/M5551
DE-F3617/M5568/S26113
D-F1264
D-F1344
D-F3289
D-M174/PAGE30/PAGES00030
D-F3706
D-F3707
D-IMS-JST021355
D-CTS2671
D-CTS10533
D-CTS4217
D-F3503
D-CTS9290
D-CTS1453
D-CTS4488
D-CTS10799
D-F2473
D-CTS9342
D-CTS3272
D-Z3728
D-Z3782
D-F1612-Z3768
D3-Y14780
D3-Y14871
D3-Y14876
D3-Y14767
D3-F2835
D3-Y14785
D3-Y14831
D3-Y14772
D3-Y14732
D3-Y14760
D3-Y15306
D3-Y15386
D3-Y15394
D3-F2549
D3-Z4975
D-F1612-M55-CTS6494
D-F1612-M55-Z1599/CTS2520
D-F1612-M55-CTS10961
D-F1612-M55-Z3763
D-F1612-M55-CTS11834
D-F1612-M55-CTS9627
D-F1612-M55-CTS4058
D-F1612-M55-V2156.1/Z3722
D-F1612-M55-Z3779
D2b-CTS7467
D2b1-CTS2259
D2b1-Z1505/CTS1439
D2b1-Z1514
D2a-CTS1849
D2a-CTS6609-Z1574-Z1572
D2a-CTS6609-Z1574-Z3840
D2a-CTS6609-Z1574-Z1577
D2a-CTS6609-Z1574-Y12546-Y11739-Z1533/CTS1228
D2a-CTS6609-Z1574-Y12546-Y11739-Z1527-Z1567/CTS11071
D2a-CTS6609-Z1574-Y12546-Y11739-Z1527-Z3850
D2a-CTS6609-Z1574-Y12546-Y11739-Z1527-Z1553/CTS6303
D2a-CTS6609-Z1574-Y12546-Y11739-Z1527-Z1541
D2a-CTS6609-Z1574-Y12546-Y11739-Z1527-Z1538
D2a1a1-P12_1/P12
D2a1a1-P12_2
D2a1a1-P12_3
D2a1-CTS291-CTS9804
D2a1b-ZS4109/Z3606
D2a1b-CTS8540
D2a1b-Z3646
D2a1b2-CTS9120
D2a1b2a-Z3642
D2a1b2a1-CTS10268
E-PF1917
E-P174/PF1674
E-CTS6048/PF1697/M5475
E-P171/PF1903
E-P152/PF1646
E-PF1563/M5424
E-P172/PF1510
E-P169/PAGE54/PF1878/PAGES00054
E-CTS5316/PF1683/M5470
E-CTS2893/M5453
E-PF1817/M5541
E2-CTS2590
E2-Z15743/Y10605
E2-V3185/CTS4847
E2-CTS7888
E2-CTS2838
E2-Z15731/Y10601
E2-Z15722/Y10596
E2-V3614/CTS9480
E2-CTS341
E2-CTS13023
E2-M98-CTS2300/Z1007
E2-M98-CTS11318
E2-M98-CTS4406
E2-M98-CTS3445
E2-M98-Z15880/YP410
E2-M98-CTS8850
E2-M98-CTS1307-CTS11436
E2-M98-M90-CTS2697
E2-M98-M90-CTS3118/Z982
E2-M98-M90-M85-M200-CTS8885
E2-M98-M90-M85-M200-Z20852/V1880
E2-M98-M90-M85-M200-L1230
E2-M98-M90-M85-M200-CTS5991/Z984
E2-M98-M90-M85-M200-CTS2629-CTS5716
E1-PF1559/M5421
E1-CTS6355/PF1703/M5479
E1a-CTS9927
E1a-Z944
E1a-CTS8867
E1a-Z15552
E1a-CTS6614/Z940
E1a-V2008/Z910
E1a-Z17396/Z15465/V1733
E1a-CTS12046/Z962
E1a-V2310/Z916
E1a-CTS6370
E1a-Z15503
E1a-CTS10964
E1a-CTS8185
E1a-Z15544
E1a-CTS1720
E1a-Z950
E1a-CTS7584
E1a-Z909
E1a-CTS4034
E1a-CTS9520
E1a-CTS12271
E1a-CTS1059
E1a-Z902
E1a-FGC12769
E1a-CTS1374
E1a-CTS5194
E1a-Z15468/V2108
E1a-CTS1172
E1a1-Z17466/V3302
E1a1-Z17464
E1a1-Z17500
E1a1-Z17422/SK566/V2316
E1a1-Z17436
E1a1-Z17423/V2407
E1a1-Z17445/V3045
E1a1-Z17478
E1a1-Z17431
E1a1-Z17432
E1a1-Z17470/SK563/BY172/V3797
E1a1-Z14528
E1a2-CTS3515
E1a2-CTS3025
E1a2-CTS2454
E1a2-CTS5155/Z934
E1a2-CTS4174/Z932
E1a2-Z897
E1a2a1a-Z885
E1a2a1a1-CTS11578/Z895
E1a2a1a1-CTS1927/Z888
E1a2a1b-CTS1285
E1a2a1b-PAGES00074/L133/PAGE74
E1a2a1b-Y947-Z15291/A173
E1b1-L489/PF1625/M5444
E1b1-P180/PF1941
E1b1-CTS1978/PF1626/M5445
E1b1-L499/PF1750/M5504
E1b1-V2598/CTS3262/PF1651/M5457
E1b1-CTS7709/M5494
E1b1-CTS4852
E1b1b-PF1529/M5020
E1b1b-CTS2727/PF1640/M5138
E1b1b-CTS11344/PF1889/M5336
E1b1b-PF1831/M5316
E1b1b1-M35.1/M35/PF1944/M35.2
E1b1b1-PF1910
E1b1b1-V4006/CTS10184/PF1779/M5274
E1b1b1-PF1755
E1b1b1-CTS3637/PF1659/M5156
E1b1b1-CTS9681/PF1775/M5270
E1b1b1-Y2520
E1b1b1-PF1861
E1b1b1-PF1863
E1b1b1a-CTS8899
E1b1b1a-CTS9527/PF2280
E1b1b1a-V68
E1b1b1a1-PF2179
E1b1b1a1-V2104/PF2116/F1244
E1b1b1a1-CTS273/PF2093
E1b1b1a1-L992
E1b1b1a1-CTS5697/PF2143
E1b1b1a1a2-CTS11387/PF2295
E1b1b1a1a2-V3794/CTS9879/PF2281/Z1240
E1b1b1a1a2-V3099/CTS4541/PF2140/Z1230
E1b1b1a1a1-FGC7696/V1216
E1b1b1a1b2-FGC2669/Y2541
E1b1b1a1b2-CTS567
E1b1b1a1b2-SK876/FGC2671/Y2547
E1b1b1a1b2-CTS2202
E1b1b1a1b-L618-L618
E1b1b1a1b-L618-CTS9086/PF2241
E1b1b1a1b-L618-CTS12527/PF2206
E1b1b1a1b-L618-V13-CTS4993
E1b1b1a1b-L618-V13-Z1896
E1b1b1a1b-L618-V13-FGC11423/Y4360
E1b1b1a1b-L618-V13-Z5016-S26015-CTS2001
E1b1b1a1b-L618-V13-Z5016-S26015-SK888/Y3762
E1b1b1b1-PF2392/M5289
E1b1b1b1-PF2395/M5042
E1b1b1b1-PF2431-PF2438-FGC18910/Y11573
E1b1b1b1-M81-V1937/PF2490/M5095
E1b1b1b1-M81-Z21106/FGC22808/Y7121
E1b1b1b1-M81-CTS3415/PF2348/M5147
E1b1b1b1-M81-CTS7132/PF2531/M5225
E1b1b1b1-M81-CTS6227/PF2525/M5199
E1b1b1b1-M81-V4166/PF2545/M5281
E1b1b1b1-M81-PF2399
E1b1b1b2-CTS11781/PF2006
E1b1b1b2-CTS6169
E1b1b1b2-FGC18282/Y5783
E1b1b1b2-Z1274-CTS1410
E1b1b1b2-Z1274-V3451/CTS9178
E1b1b1b2-Z1274-FGC18689/Y5865
E1b1b1b2-Z1274-CTS9923/Z1273
E1b1b1b2-Z1274-CTS1620
E1b1b1b2-Z1274-CTS1991
E1b1b1b2-Z1274-V1515/Z1074
E1b1b1b2-Z1274-CTS2086
E1b1b1b2-Z1274-CTS869/Z1248
E1b1b1b2-Z1274-Y5917
E1b1b1b2-Z1274-CTS4116
E1b1b1b2-Z1274-CTS10884
E1b1b1b2-M34-M123/PF2023
E1b1b1b2-M34-M34/PF2022
E1b1b1b2-M34-PF2000
E1b1b1b2-M34-Y2931
E1b1b1b2-M34-CTS491/PF1960/Z1144
E1b1b1b2-M34-L799
E1b1b1b2-M34-L798.1/L798.2/L798
E1b1b1b2-M34-L355.1/L355.2/L355
E1b1b1b2-M34-M84-CTS8973
E1b1b1b2-M34-M84-Y14891-Y15458
E1b1b1b2-M34-M84-PF6751-PF6748-Y6720-S9747-Y15553-Y15706
E1b1b1b2-M34-Z841-Z849-L791-Y2959
E1b1b1b2-M34-Z841-Z849-L791-CTS8037/Z852
E1b1b1b2-M34-Z841-Z849-L791-Z20962/Y4180
E1b1a-V2055/M4756
E1b1a-M4917
E1b1a-V38/TSC0077541
E1b1a-CTS3809/M4805
E1b1a-M4914
E1b1a-CTS9558/M4876
E1b1a-M4767
E1b1a-CTS9723/M4877
E1b1a-FGC10951/Y1706
E1b1a-M4892
E1b1a-CTS809
E1b1a-M4891
E1b1a1-KHS1479188/CTS11461
E1b1a1-PAGES00106/PAGE106
E1b1a1-Z1123/CTS6056
E1b1a1a2-Z5994
E1b1a1a2-V1452-Z5999
E1b1a1a1-CTS6046/M4830
E1b1a1a1-CTS7241
E1b1a1a1-FGC10985/Y1752
E1b1a1a1-M4727-M4225-U175-CTS1036-CTS4700-CTS205-CTS7808
E1b1a1a1-M4727-M4225-U175-M4254-CTS2642/M4238
E1b1a1a1-M4727-M4225-U175-M4254-M4232-Z1720-M4217-M4224
E1b1a1a1-M4727-M4225-U175-M4254-M4232-Z1720-M4217-CTS1251-CTS10689/M4113
E1b1a1a1-M4727-M4225-U175-M4254-M4232-Z1720-M4041-M3988-Z1788-V3862/CTS9968
E1b1a1a1-M4727-M4225-U175-M4254-M4232-Z1720-M4041-M3988-Z1788-Z1788/M3907
E1b1a1a1-Y1623-M4706-CTS5078/M4706
E1b1a1a1-Y1623-M4706-M58-Z21960/Y10574
E1b1a1a1-Y1623-M4706-M58-Z21959/Y10573
E1b1a1a1-Y1623-M4706-L485-CTS6649-CTS3274-Z6012-Z6017-Z6018-L701
E1b1a1a1-Y1623-M4706-L485-L514-L515-L515
E1b1a1a1-Y1623-M4706-L485-L514-L515-Z1893-Z1893
E1b1a1a1-Y1623-M4706-L485-L514-M4694-M191-CTS7773/Z1293/M4691
E1b1a1a1-Y1623-M4706-L485-L514-M4694-M191-M4698
E1b1a1a1-Y1623-M4706-L485-L514-M4694-M191-CTS776-M4318
E1b1a1a1-Y1623-M4706-L485-L514-M4694-M191-U174-M4670-P116-P113-P113
E1b1a1a1-Y1623-M4706-L485-L514-M4694-M191-U174-M4670-M4667-CTS5299-Z5977-Z5977
E1b1a1a1-Y1623-M4706-L485-L514-M4694-M191-U174-M4670-M4667-M4665-Z1704-Z1704/CTS8030
E1b1a1a1-Y1623-M4706-L485-L514-M4694-M191-U174-M4670-M4667-M4665-Z1704-M4437-CTS9106/M4451
E1b1a1a1-Y1623-M4706-L485-L514-M4694-M191-U174-M4670-M4667-M4665-Z1704-Z5982-Z5983-Z5983
CF-M3711/CTS6376/PF2697
C-F2067
C-Z3986
C-V2710/F1871
C-F1367
C-FGC16179/Y6682
C-V2258/F1307
C-F3670
C-Z7606/Y1767
C-Z3958
C-F847
C-Z7912/Y2802
C1-Z1426/F3393
C1c1a-P33_1
C1c1a-P33_2
C1c1a-P33_3
C1a1-Z7178/K688
C1a1-CTS684
C1a1-Z1425/CTS11072
C1a1-Z1421
C1a1-Z7165/K684
C1a1-CTS11613
C1a1-M8
C1a1-Z1422/CTS10639
C1a1-Z3996
C1a1-Z1416
C1a1-Z4104
C1a1-Z4122
C1a1-Z4118
C1a1-Z4150
C1a1-Z4126
C1a1-Z7851/S16874
C1a-V20-V86-Z29328/Y10484
C1a-V20-V86-Z28913/Y11434
C1a-V20-V86-Y11386
C1a-V20-V86-Y12173
C1a-V20-V86-F870
C1a-V20-V86-V222-Y11679
C1a-V20-V86-V222-Z28981/Y12176
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R-Y482-M479-FGC12622/Y3410
R-Y482-M479-V3852.1/F2963
R-Y482-M479-SK2138/FGC12579/V1807/Y3375
R-Y482-M479-FGC12596/Y3402
R-Y482-M479-FGC12634/Y3411
R-Y482-M479-FGC13181/Y3319
R-Y482-M479-FGC12594/Y3383
R-Y482-M479-FGC12730/Y3318
R-Y482-M479-FGC12733/Y3389
R-Y482-M479-FGC22614/Y3544
R-Y482-M479-FGC22601/Y7742
R-Y482-M479-F3302
R-Y482-M479-F802
R-Y482-M479-FGC22586/Y8738
R-Y482-M479-Y3427
R-Y482-M479-FGC12719/Y3405
R-Y482-M479-FGC22600/Y8762
R-Y482-M479-L266/PF6108
R-Y482-M479-FGC22579/Y8737
R-Y482-M479-FGC12569/Y5098
R-Y482-M479-Y8763-L1069-FGC12690/Y3333
R-Y482-M479-Y8763-L1069-Y3329
R-Y482-M479-Y8763-L1069-FGC12697/Y3327
R-Y482-M479-Y8763-L1069-FGC12699/Y3326
R-Y482-M479-Y8763-Y8766-V3714-L295-L295
R-Y482-M479-Y8763-Y8766-V3714-L295-Y1280-Y1331-Y1331
R-Y482-M479-Y8763-Y8766-V3714-L295-Y1334-V3467/Y1334
R-Y482-M479-Y8763-Y8766-V3714-L295-Y1334-Y1340-L294-L362/L294/S312

7 comments on “Y-SNP calls for Oase 1
  1. […] Y-SNP calls for Oase 1 show that he probably belonged to Y haplogroup IJK*. He had a positive call for the SNP […]

  2. PJ says:

    How do you reconcile your finding of IJK with the authors of F*. ?

  3. PJ says:

    i think they state they explicitly excluded IJK

  4. PJ says:

    Ok Thanks. NIce work
    If you don;t mind sharing (f you havent already explained elsewhere) – how do you do you work ? Ie did you use a programme to convert their BAM file into readable SNPs ?

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