Below are derived allele counts and total numbers of reads for SNPs that have a large effect on phenotype for five new ancient genomes from the Zagros Mountains of Iran. Nonzero derived allele counts are in bold. Note that small derived allele counts may be due to DNA damage.
ASIP, rs2424984, Veddoid brown skin
Sample Period Date BC D/T AH1 Early Neolithic Unknown 3/3 AH2 Early Neolithic 8205–7756 1/1 AH4 Early Neolithic 8204–7755 0/2 WC1 Early Neolithic 7455–7082 16/16
ASIP, rs6058017, Veddoid brown skin
Sample Period Date BC D/T AH1 Early Neolithic Unknown 2/2 WC1 Early Neolithic 7455–7082 15/15 F38 Early Iron Age 971–832 0/2
EDAR, rs3827760, Mongoloid teeth, hair, etc.
Sample Period Date BC D/T AH1 Early Neolithic Unknown 0/1 AH2 Early Neolithic 8205–7756 0/1 AH4 Early Neolithic 8204–7755 0/2 WC1 Early Neolithic 7455–7082 0/14 F38 Early Iron Age 971–832 0/5
IRF4, rs12203592, light hair and eyes, freckling
Sample Period Date BC D/T AH1 Early Neolithic Unknown 0/1 AH2 Early Neolithic 8205–7756 0/1 AH4 Early Neolithic 8204–7755 0/3 WC1 Early Neolithic 7455–7082 0/22 F38 Early Iron Age 971–832 0/4
KITLG, rs12821256, blond hair
Sample Period Date BC D/T AH2 Early Neolithic 8205–7756 0/2 AH4 Early Neolithic 8204–7755 0/1 WC1 Early Neolithic 7455–7082 0/12 F38 Early Iron Age 971–832 0/2
KITLG, rs642742, Veddoid brown skin
Sample Period Date BC D/T AH1 Early Neolithic Unknown 1/1 AH2 Early Neolithic 8205–7756 1/1 AH4 Early Neolithic 8204–7755 1/2 WC1 Early Neolithic 7455–7082 16/16 F38 Early Iron Age 971–832 2/2
MC1R, rs1110400, red hair
Sample Period Date BC D/T AH1 Early Neolithic Unknown 0/2 AH2 Early Neolithic 8205–7756 0/1 AH4 Early Neolithic 8204–7755 0/3 WC1 Early Neolithic 7455–7082 0/10
MC1R, rs11547464, red hair
Sample Period Date BC D/T AH1 Early Neolithic Unknown 0/3 AH2 Early Neolithic 8205–7756 0/2 AH4 Early Neolithic 8204–7755 1/2 WC1 Early Neolithic 7455–7082 0/15 F38 Early Iron Age 971–832 0/1
MC1R, rs1805005, blond hair, fair skin
Sample Period Date BC D/T AH1 Early Neolithic Unknown 0/2 AH2 Early Neolithic 8205–7756 0/1 AH4 Early Neolithic 8204–7755 0/1 WC1 Early Neolithic 7455–7082 0/12 F38 Early Iron Age 971–832 0/5
MC1R, rs1805006, red hair, fair skin
Sample Period Date BC D/T AH1 Early Neolithic Unknown 0/1 AH2 Early Neolithic 8205–7756 0/1 AH4 Early Neolithic 8204–7755 0/3 WC1 Early Neolithic 7455–7082 0/14 F38 Early Iron Age 971–832 0/2
MC1R, rs1805007, red hair, fair skin
Sample Period Date BC D/T AH1 Early Neolithic Unknown 0/3 AH2 Early Neolithic 8205–7756 0/1 AH4 Early Neolithic 8204–7755 0/3 WC1 Early Neolithic 7455–7082 0/14 F38 Early Iron Age 971–832 0/1
MC1R, rs1805008, red hair, fair skin
Sample Period Date BC D/T AH1 Early Neolithic Unknown 0/2 AH2 Early Neolithic 8205–7756 0/2 AH4 Early Neolithic 8204–7755 0/2 WC1 Early Neolithic 7455–7082 0/8 F38 Early Iron Age 971–832 0/1
MC1R, rs1805009, red hair, fair skin
Sample Period Date BC D/T AH1 Early Neolithic Unknown 0/1 AH2 Early Neolithic 8205–7756 0/1 AH4 Early Neolithic 8204–7755 0/2 WC1 Early Neolithic 7455–7082 1/15 F38 Early Iron Age 971–832 0/1
MCM6, rs182549, ability to digest milk
Sample Period Date BC D/T AH1 Early Neolithic Unknown 1/3 AH2 Early Neolithic 8205–7756 0/1 AH4 Early Neolithic 8204–7755 2/5 WC1 Early Neolithic 7455–7082 1/19 F38 Early Iron Age 971–832 0/2
MCM6, rs4988235, ability to digest milk
Sample Period Date BC D/T AH1 Early Neolithic Unknown 0/1 AH2 Early Neolithic 8205–7756 0/1 AH4 Early Neolithic 8204–7755 0/3 WC1 Early Neolithic 7455–7082 2/11 F38 Early Iron Age 971–832 0/2
OCA2, rs1800407, green or hazel eyes
Sample Period Date BC D/T AH1 Early Neolithic Unknown 0/1 AH4 Early Neolithic 8204–7755 0/1 WC1 Early Neolithic 7455–7082 1/19 F38 Early Iron Age 971–832 0/2
OCA2, rs1800414, Mongoloid light skin
Sample Period Date BC D/T AH1 Early Neolithic Unknown 0/2 AH4 Early Neolithic 8204–7755 0/1 WC1 Early Neolithic 7455–7082 0/15 F38 Early Iron Age 971–832 0/3
OCA2/HERC2, rs12913832, blue eyes
Sample Period Date BC D/T AH1 Early Neolithic Unknown 0/1 AH2 Early Neolithic 8205–7756 0/3 WC1 Early Neolithic 7455–7082 7/20
SLC24A5, rs1426654, Caucasoid light skin
Sample Period Date BC D/T AH1 Early Neolithic Unknown 2/4 AH2 Early Neolithic 8205–7756 0/4 AH4 Early Neolithic 8204–7755 2/2 WC1 Early Neolithic 7455–7082 5/13 F38 Early Iron Age 971–832 4/4
SLC45A2, rs16891982, Caucasoid light skin
Sample Period Date BC D/T AH1 Early Neolithic Unknown 0/1 AH2 Early Neolithic 8205–7756 0/1 AH4 Early Neolithic 8204–7755 0/1 WC1 Early Neolithic 7455–7082 0/13
TYR, rs1042602, light skin, absence of freckles
Sample Period Date BC D/T AH1 Early Neolithic Unknown 0/2 AH2 Early Neolithic 8205–7756 0/1 AH4 Early Neolithic 8204–7755 0/1 WC1 Early Neolithic 7455–7082 0/19 F38 Early Iron Age 971–832 0/3
TYR, rs1393350, blond hair, blue eyes
Sample Period Date BC D/T AH1 Early Neolithic Unknown 0/1 AH2 Early Neolithic 8205–7756 0/1 WC1 Early Neolithic 7455–7082 0/16 F38 Early Iron Age 971–832 0/5
TYRP1, rs2733831, light hair and eyes
Sample Period Date BC D/T AH1 Early Neolithic Unknown 0/1 WC1 Early Neolithic 7455–7082 0/7 F38 Early Iron Age 971–832 0/2
Reblogged this on Norah4you's Weblog and commented:
A special thanks to Genetiker who allows me to reblogg this interesting results.