Below are derived allele counts and total numbers of reads for SNPs that have a large effect on phenotype for new genomes from prehistoric Spain. Nonzero derived allele counts are highlighted. Note that small derived allele counts may be due to DNA damage.
ASIP, rs2424984, Veddoid brown skin
| Sample |
Period |
Date BC |
D/T |
| MUR |
Early Neolithic |
5295–5075 |
5/5 |
| ATP019 |
Early Neolithic |
5215–5030 |
4/4 |
| POR002 |
Copper Age |
3335–2944 |
2/2 |
| ATP016 |
Copper Age |
3261–2916 |
14/14 |
| ATP12 |
Copper Age |
3010–2879 |
3/3 |
| ATP002 |
Copper Age |
2899–2678 |
8/8 |
| ESP005 |
Bronze Age |
2200–1550 |
3/3 |
ASIP, rs6058017, Veddoid brown skin
| Sample |
Period |
Date BC |
D/T |
| MUR |
Early Neolithic |
5295–5075 |
8/8 |
| ATP019 |
Early Neolithic |
5215–5030 |
2/2 |
| ATP016 |
Copper Age |
3261–2916 |
11/11 |
| ATP12 |
Copper Age |
3010–2879 |
1/1 |
| ATP002 |
Copper Age |
2899–2678 |
5/5 |
| ESP005 |
Bronze Age |
2200–1550 |
1/1 |
EDAR, rs3827760, Mongoloid teeth, hair, etc.
| Sample |
Period |
Date BC |
D/T |
| MUR |
Early Neolithic |
5295–5075 |
0/8 |
| ATP019 |
Early Neolithic |
5215–5030 |
0/7 |
| C40331 |
Late Neolithic |
3760–3637 |
0/1 |
| POR003 |
Copper Age |
3622–3369 |
0/2 |
| ATP016 |
Copper Age |
3261–2916 |
0/17 |
| POR004 |
Copper Age |
3091–2917 |
0/2 |
| ATP12 |
Copper Age |
3010–2879 |
0/1 |
| ATP002 |
Copper Age |
2899–2678 |
0/14 |
| ESP005 |
Bronze Age |
2200–1550 |
0/1 |
IRF4, rs12203592, light hair and eyes, freckling
| Sample |
Period |
Date BC |
D/T |
| MUR |
Early Neolithic |
5295–5075 |
0/3 |
| ATP019 |
Early Neolithic |
5215–5030 |
0/1 |
| C40331 |
Late Neolithic |
3760–3637 |
1/4 |
| POR003 |
Copper Age |
3622–3369 |
0/1 |
| ATP016 |
Copper Age |
3261–2916 |
0/20 |
| ATP12 |
Copper Age |
3010–2879 |
0/4 |
| ATP002 |
Copper Age |
2899–2678 |
0/16 |
| ESP005 |
Bronze Age |
2200–1550 |
0/1 |
KITLG, rs12821256, blond hair
| Sample |
Period |
Date BC |
D/T |
| MUR |
Early Neolithic |
5295–5075 |
0/2 |
| ATP005 |
Early Neolithic |
5215–5030 |
0/1 |
| ATP019 |
Early Neolithic |
5215–5030 |
0/3 |
| POR003 |
Copper Age |
3622–3369 |
0/1 |
| POR002 |
Copper Age |
3335–2944 |
0/1 |
| ATP016 |
Copper Age |
3261–2916 |
0/12 |
| ATP12 |
Copper Age |
3010–2879 |
0/5 |
| ATP002 |
Copper Age |
2899–2678 |
0/13 |
| ESP005 |
Bronze Age |
2200–1550 |
0/3 |
| PIR001 |
Bronze Age |
2200–1550 |
0/1 |
KITLG, rs642742, Veddoid brown skin
| Sample |
Period |
Date BC |
D/T |
| MUR |
Early Neolithic |
5295–5075 |
8/8 |
| ATP019 |
Early Neolithic |
5215–5030 |
3/3 |
| C40331 |
Late Neolithic |
3760–3637 |
0/2 |
| POR003 |
Copper Age |
3622–3369 |
1/1 |
| ATP016 |
Copper Age |
3261–2916 |
20/20 |
| ATP12 |
Copper Age |
3010–2879 |
1/5 |
| ATP002 |
Copper Age |
2899–2678 |
4/12 |
MC1R, rs1110400, red hair
| Sample |
Period |
Date BC |
D/T |
| MUR |
Early Neolithic |
5295–5075 |
0/7 |
| ATP019 |
Early Neolithic |
5215–5030 |
0/2 |
| C40331 |
Late Neolithic |
3760–3637 |
0/1 |
| POR002 |
Copper Age |
3335–2944 |
0/2 |
| ATP016 |
Copper Age |
3261–2916 |
0/19 |
| ATP002 |
Copper Age |
2899–2678 |
0/13 |
| ESP005 |
Bronze Age |
2200–1550 |
0/5 |
| PIR001 |
Bronze Age |
2200–1550 |
0/2 |
MC1R, rs11547464, red hair
| Sample |
Period |
Date BC |
D/T |
| MUR |
Early Neolithic |
5295–5075 |
1/4 |
| ATP005 |
Early Neolithic |
5215–5030 |
0/1 |
| ATP019 |
Early Neolithic |
5215–5030 |
0/3 |
| SAN216 |
Late Neolithic |
3776–3653 |
0/2 |
| POR002 |
Copper Age |
3335–2944 |
0/3 |
| ATP016 |
Copper Age |
3261–2916 |
0/19 |
| ATP002 |
Copper Age |
2899–2678 |
0/13 |
| ESP005 |
Bronze Age |
2200–1550 |
0/7 |
| PIR001 |
Bronze Age |
2200–1550 |
0/1 |
MC1R, rs1805005, blond hair, fair skin
| Sample |
Period |
Date BC |
D/T |
| MUR |
Early Neolithic |
5295–5075 |
0/5 |
| ATP019 |
Early Neolithic |
5215–5030 |
0/3 |
| C40331 |
Late Neolithic |
3760–3637 |
0/1 |
| POR002 |
Copper Age |
3335–2944 |
0/1 |
| ATP016 |
Copper Age |
3261–2916 |
0/16 |
| ATP12 |
Copper Age |
3010–2879 |
0/4 |
| ATP002 |
Copper Age |
2899–2678 |
0/6 |
| ESP005 |
Bronze Age |
2200–1550 |
0/5 |
MC1R, rs1805006, red hair, fair skin
| Sample |
Period |
Date BC |
D/T |
| MUR |
Early Neolithic |
5295–5075 |
0/7 |
| ATP019 |
Early Neolithic |
5215–5030 |
0/5 |
| POR002 |
Copper Age |
3335–2944 |
0/2 |
| ATP016 |
Copper Age |
3261–2916 |
0/15 |
| ATP12 |
Copper Age |
3010–2879 |
0/3 |
| ATP002 |
Copper Age |
2899–2678 |
0/10 |
| ESP005 |
Bronze Age |
2200–1550 |
0/4 |
MC1R, rs1805007, red hair, fair skin
| Sample |
Period |
Date BC |
D/T |
| MUR |
Early Neolithic |
5295–5075 |
2/7 |
| ATP005 |
Early Neolithic |
5215–5030 |
0/1 |
| ATP019 |
Early Neolithic |
5215–5030 |
0/3 |
| SAN216 |
Late Neolithic |
3776–3653 |
0/2 |
| POR002 |
Copper Age |
3335–2944 |
0/2 |
| ATP016 |
Copper Age |
3261–2916 |
0/21 |
| ATP002 |
Copper Age |
2899–2678 |
0/15 |
| ESP005 |
Bronze Age |
2200–1550 |
0/6 |
| PIR001 |
Bronze Age |
2200–1550 |
1/2 |
MC1R, rs1805008, red hair, fair skin
| Sample |
Period |
Date BC |
D/T |
| MUR |
Early Neolithic |
5295–5075 |
0/5 |
| ATP019 |
Early Neolithic |
5215–5030 |
0/1 |
| C40331 |
Late Neolithic |
3760–3637 |
0/1 |
| POR002 |
Copper Age |
3335–2944 |
0/1 |
| ATP016 |
Copper Age |
3261–2916 |
0/20 |
| ATP002 |
Copper Age |
2899–2678 |
0/10 |
| ESP005 |
Bronze Age |
2200–1550 |
0/6 |
| PIR001 |
Bronze Age |
2200–1550 |
0/1 |
MC1R, rs1805009, red hair, fair skin
| Sample |
Period |
Date BC |
D/T |
| MUR |
Early Neolithic |
5295–5075 |
0/3 |
| ATP019 |
Early Neolithic |
5215–5030 |
0/4 |
| POR002 |
Copper Age |
3335–2944 |
0/3 |
| ATP016 |
Copper Age |
3261–2916 |
0/21 |
| ATP12 |
Copper Age |
3010–2879 |
0/7 |
| ATP002 |
Copper Age |
2899–2678 |
0/8 |
| ESP005 |
Bronze Age |
2200–1550 |
0/4 |
MCM6, rs182549, ability to digest milk
| Sample |
Period |
Date BC |
D/T |
| MUR |
Early Neolithic |
5295–5075 |
0/5 |
| ATP019 |
Early Neolithic |
5215–5030 |
0/5 |
| C40331 |
Late Neolithic |
3760–3637 |
0/2 |
| POR002 |
Copper Age |
3335–2944 |
0/2 |
| ATP016 |
Copper Age |
3261–2916 |
0/15 |
| ATP12 |
Copper Age |
3010–2879 |
0/4 |
| ATP002 |
Copper Age |
2899–2678 |
0/6 |
| ESP005 |
Bronze Age |
2200–1550 |
1/1 |
MCM6, rs4988235, ability to digest milk
| Sample |
Period |
Date BC |
D/T |
| MUR |
Early Neolithic |
5295–5075 |
0/4 |
| ATP019 |
Early Neolithic |
5215–5030 |
0/6 |
| ATP016 |
Copper Age |
3261–2916 |
0/17 |
| ATP12 |
Copper Age |
3010–2879 |
0/5 |
| ATP002 |
Copper Age |
2899–2678 |
0/19 |
| ESP005 |
Bronze Age |
2200–1550 |
0/3 |
OCA2, rs1800407, green or hazel eyes
| Sample |
Period |
Date BC |
D/T |
| MUR |
Early Neolithic |
5295–5075 |
0/4 |
| ATP019 |
Early Neolithic |
5215–5030 |
0/2 |
| SAN216 |
Late Neolithic |
3776–3653 |
0/1 |
| POR002 |
Copper Age |
3335–2944 |
0/1 |
| ATP016 |
Copper Age |
3261–2916 |
0/13 |
| ATP12 |
Copper Age |
3010–2879 |
0/6 |
| ATP002 |
Copper Age |
2899–2678 |
0/12 |
| ESP005 |
Bronze Age |
2200–1550 |
0/1 |
OCA2, rs1800414, Mongoloid light skin
| Sample |
Period |
Date BC |
D/T |
| MUR |
Early Neolithic |
5295–5075 |
0/2 |
| ATP019 |
Early Neolithic |
5215–5030 |
0/3 |
| POR002 |
Copper Age |
3335–2944 |
0/1 |
| ATP016 |
Copper Age |
3261–2916 |
0/22 |
| ATP12 |
Copper Age |
3010–2879 |
0/6 |
| ATP002 |
Copper Age |
2899–2678 |
0/16 |
| ESP005 |
Bronze Age |
2200–1550 |
0/6 |
| PIR001 |
Bronze Age |
2200–1550 |
0/1 |
OCA2/HERC2, rs12913832, blue eyes
| Sample |
Period |
Date BC |
D/T |
| MUR |
Early Neolithic |
5295–5075 |
1/3 |
| ATP019 |
Early Neolithic |
5215–5030 |
0/3 |
| SAN216 |
Late Neolithic |
3776–3653 |
0/1 |
| C40331 |
Late Neolithic |
3760–3637 |
0/1 |
| POR002 |
Copper Age |
3335–2944 |
0/3 |
| ATP016 |
Copper Age |
3261–2916 |
0/21 |
| POR004 |
Copper Age |
3091–2917 |
0/1 |
| ATP12 |
Copper Age |
3010–2879 |
0/6 |
| ATP002 |
Copper Age |
2899–2678 |
6/8 |
SLC24A5, rs1426654, Caucasoid light skin
| Sample |
Period |
Date BC |
D/T |
| MUR |
Early Neolithic |
5295–5075 |
2/2 |
| ATP019 |
Early Neolithic |
5215–5030 |
3/3 |
| SAN216 |
Late Neolithic |
3776–3653 |
1/1 |
| C40331 |
Late Neolithic |
3760–3637 |
0/3 |
| POR002 |
Copper Age |
3335–2944 |
1/1 |
| ATP016 |
Copper Age |
3261–2916 |
18/18 |
| POR004 |
Copper Age |
3091–2917 |
1/1 |
| ATP12 |
Copper Age |
3010–2879 |
3/3 |
| ATP002 |
Copper Age |
2899–2678 |
13/13 |
| ESP005 |
Bronze Age |
2200–1550 |
3/3 |
SLC45A2, rs16891982, Caucasoid light skin
| Sample |
Period |
Date BC |
D/T |
| MUR |
Early Neolithic |
5295–5075 |
4/4 |
| POR003 |
Copper Age |
3622–3369 |
1/1 |
| ATP016 |
Copper Age |
3261–2916 |
6/13 |
| POR004 |
Copper Age |
3091–2917 |
0/1 |
| ATP12 |
Copper Age |
3010–2879 |
0/3 |
| ATP002 |
Copper Age |
2899–2678 |
0/8 |
| ESP005 |
Bronze Age |
2200–1550 |
1/4 |
| PIR001 |
Bronze Age |
2200–1550 |
1/1 |
TYR, rs1042602, light skin, absence of freckles
| Sample |
Period |
Date BC |
D/T |
| MUR |
Early Neolithic |
5295–5075 |
0/6 |
| ATP019 |
Early Neolithic |
5215–5030 |
0/4 |
| SAN216 |
Late Neolithic |
3776–3653 |
0/1 |
| C40331 |
Late Neolithic |
3760–3637 |
0/1 |
| POR003 |
Copper Age |
3622–3369 |
0/1 |
| POR002 |
Copper Age |
3335–2944 |
0/6 |
| ATP016 |
Copper Age |
3261–2916 |
0/20 |
| ATP12 |
Copper Age |
3010–2879 |
0/1 |
| ATP002 |
Copper Age |
2899–2678 |
4/10 |
| ESP005 |
Bronze Age |
2200–1550 |
0/1 |
TYR, rs1393350, blond hair, blue eyes
| Sample |
Period |
Date BC |
D/T |
| MUR |
Early Neolithic |
5295–5075 |
0/6 |
| ATP005 |
Early Neolithic |
5215–5030 |
0/1 |
| ATP019 |
Early Neolithic |
5215–5030 |
0/1 |
| C40331 |
Late Neolithic |
3760–3637 |
1/1 |
| POR002 |
Copper Age |
3335–2944 |
1/2 |
| ATP016 |
Copper Age |
3261–2916 |
0/19 |
| POR004 |
Copper Age |
3091–2917 |
1/1 |
| ATP12 |
Copper Age |
3010–2879 |
0/3 |
| ATP002 |
Copper Age |
2899–2678 |
0/15 |
| ESP005 |
Bronze Age |
2200–1550 |
2/4 |
TYRP1, rs2733831, light hair and eyes
| Sample |
Period |
Date BC |
D/T |
| MUR |
Early Neolithic |
5295–5075 |
1/5 |
| SAN216 |
Late Neolithic |
3776–3653 |
1/1 |
| POR003 |
Copper Age |
3622–3369 |
0/1 |
| ATP016 |
Copper Age |
3261–2916 |
0/18 |
| ATP12 |
Copper Age |
3010–2879 |
3/3 |
| ATP002 |
Copper Age |
2899–2678 |
4/9 |
| ESP005 |
Bronze Age |
2200–1550 |
1/1 |