Analyses of a fifth ancient English genome

Below are the results of analyses of ERS389799, the fifth of the five Iron Age and Anglo-Saxon samples from Hinxton, England.

The data indicate that ERS389799 was female. The mt-SNP calls show that she belonged to mitochondrial haplogroup H2a2a1.

ERS389799 didn’t have any of the K12b Gedrosia component. She had a bit less of the MDLP Iberian components than ERS389796, and a bit more of them than ERS389798.

The abstract for the paper on these ancient English genomes mentions that one of the two Iron Age genomes is high coverage. ERS389798 is the high coverage genome, so we know that ERS389798 is one of the two Iron Age samples. The abstract also mentions that the Iron Age samples had a greater affinity with Iberian samples. Since ERS389797 had such large amounts of the MDLP Iberian components, we can deduce that ERS389797 is the other Iron Age sample. The three samples from the Anglo-Saxon period are therefore ERS389795, ERS389796, and ERS389799. The abstract mentioned that the samples from the Anglo-Saxon period had a greater affinity with Finnish samples. We can see that this finding is due to ERS389795, which had large amounts of the MDLP Balto-Finnic components.

globe4

  • 88.51% European
  • 5.93% African
  • 5.57% Amerindian
  • 0.00% Asian

globe10

  • 85.96% Atlantic_Baltic
  • 6.00% Southern
  • 5.37% Neo_African
  • 1.41% Palaeo_African
  • 1.26% Amerindian
  • 0.00% Australasian
  • 0.00% East_Asian
  • 0.00% Siberian
  • 0.00% South_Asian
  • 0.00% West_Asian

globe13

  • 60.87% North_European
  • 31.98% Mediterranean
  • 5.02% West_African
  • 1.57% Palaeo_African
  • 0.55% Amerindian
  • 0.01% Southwest_Asian
  • 0.00% Arctic
  • 0.00% Australasian
  • 0.00% East_African
  • 0.00% East_Asian
  • 0.00% Siberian
  • 0.00% South_Asian
  • 0.00% West_Asian

K7b

  • 85.37% Atlantic_Baltic
  • 7.16% Southern
  • 6.86% African
  • 0.50% Siberian
  • 0.11% West_Asian
  • 0.00% East_Asian
  • 0.00% South_Asian

K10a

  • 67.95% Atlantic_Baltic
  • 25.60% Mediterranean
  • 5.34% Sub_Saharan
  • 1.11% Palaeoafrican
  • 0.00% East_Asian
  • 0.00% Red_Sea
  • 0.00% Siberian
  • 0.00% South_Asian
  • 0.00% Southeast_Asian
  • 0.00% West_Asian

K12b

  • 54.51% North_European
  • 38.02% Atlantic_Med
  • 5.01% Sub_Saharan
  • 2.32% East_African
  • 0.08% Northwest_African
  • 0.06% Caucasus
  • 0.00% East_Asian
  • 0.00% Gedrosia
  • 0.00% Siberian
  • 0.00% South_Asian
  • 0.00% Southeast_Asian
  • 0.00% Southwest_Asian

dv3

  • 59.73% West_European
  • 24.91% Mediterranean
  • 8.22% East_European
  • 5.41% Palaeo_African
  • 1.69% Neo_African
  • 0.03% Northwest_African
  • 0.00% East_African
  • 0.00% Northeast_Asian
  • 0.00% South_Asian
  • 0.00% Southeast_Asian
  • 0.00% Southwest_Asian
  • 0.00% West_Asian

MDLP K=5

  • 47.18% West-Eurasian
  • 42.46% Paleo-mediterranean
  • 9.97% Caucasian
  • 0.39% South-Asian
  • 0.00% East-Eurasian

MDLP K=6

  • 46.71% West-Eurasian
  • 38.86% Paleo-Mediterranean
  • 8.34% Caucasian
  • 6.08% North-West-Eurasian
  • 0.01% South-Asian
  • 0.00% East-Euroasian

MDLP K=7

  • 44.62% West-Eurasian
  • 37.77% Paleo-Mediterranean
  • 9.60% Paleo-Scandinavian
  • 7.98% Caucasian
  • 0.02% South-Central-Asian
  • 0.00% Altaic-Turkic
  • 0.00% Volga-Uralic

MDLP K=8

  • 48.49% West-European
  • 26.70% East-European
  • 12.52% Caucasian
  • 6.54% Paleo-Mediterranean
  • 5.72% Paleo-Scandinavian
  • 0.02% South-Central-Asian
  • 0.00% Altaic-Turkic
  • 0.00% Volga-Finnic

MDLP K=9

  • 48.53% West-European
  • 24.40% East-European
  • 12.44% Caucasian
  • 6.14% Paleo-Mediterranean
  • 5.83% Paleo-Scandinavian
  • 2.63% Paleo-Balkanic
  • 0.02% South-Central-Asian
  • 0.00% Altaic-Turkic
  • 0.00% Volga-Finnic

MDLP K=10

  • 52.96% British
  • 15.28% Iberian
  • 10.70% East-European
  • 6.88% Paleo-Mediterranean
  • 5.82% Paleo-North-European
  • 5.13% Caucasian
  • 2.83% Paleo-Balkanic
  • 0.40% South-Central-Asian
  • 0.00% Altaic-Turkic
  • 0.00% Volga-Finnic

MDLP K=11

  • 53.87% Celto-Germanic
  • 14.24% Iberian
  • 10.69% East-European
  • 6.43% Mediterranean
  • 5.61% Paleo-North-European
  • 5.18% Caucasian
  • 2.85% Paleo-Balkanic
  • 0.58% Volga-Uralic
  • 0.56% South-Central-Asian
  • 0.00% Altaic-Turkic
  • 0.00% Uralic-Permic

MDLP K=12

  • 54.58% Celto-Germanic
  • 13.81% Iberian
  • 11.87% East-European
  • 6.06% Paleo-Mediterranean
  • 6.03% Paleo-North-European
  • 4.22% Caucasian
  • 2.58% Paleo-Balkanic
  • 0.41% South-Central Asian
  • 0.41% Volga-Uralic
  • 0.01% Balto-Finnic
  • 0.00% Alatic-Turkic
  • 0.00% Uralic-Permic

MDLP K=13

  • 25.79% Paleo-Mediterranean
  • 23.05% Altaic
  • 13.07% East-Mediterranean
  • 12.15% Mediterrean
  • 8.28% Baltic-Finnic
  • 7.90% South-Central-Asian
  • 7.06% Celto-Germanic
  • 2.03% Paleo-North-European
  • 0.63% Caucasian
  • 0.02% Iberian
  • 0.00% East-European
  • 0.00% Uralic-Permic
  • 0.00% Volga-Uralic

MDLP K=14

  • 49.71% Celto-Germanic
  • 11.55% Iberian
  • 11.01% Balto-Slavic
  • 8.83% East-Mediterranean
  • 6.13% Paleo-Scandinavian
  • 5.21% Mediterranean
  • 3.51% Paleo-Mediterranean
  • 2.34% Paleo-Balkanic
  • 1.47% Caucasian
  • 0.15% South-Central-Asian
  • 0.08% Volga-Finnic
  • 0.00% Altaic
  • 0.00% Balto-Finnic
  • 0.00% Uralic-Permic

MDLP K=15

  • 50.64% Celto-Germanic
  • 11.28% Balto-Slavic
  • 11.00% Iberian
  • 8.17% East-Mediterranean
  • 6.19% Paleo-North-European
  • 5.23% Balkanic-1
  • 3.29% West-Mediterranean
  • 2.37% Balkanic-2
  • 1.49% Caucasian
  • 0.24% South-Central-Asian
  • 0.11% Volga-Uralic
  • 0.00% Balto-Finnic
  • 0.00% East-Altaic
  • 0.00% Uralic-Permic
  • 0.00% West-Altaic

MDLP World-22

  • 46.14% North-East-European
  • 38.16% Atlantic_Mediterranean_Neolithic
  • 11.02% North-European-Mesolithic
  • 3.02% Pygmy
  • 1.65% South-African
  • 0.01% Sub-Saharian
  • 0.00% Arctic-Amerind
  • 0.00% Austronesian
  • 0.00% East-Siberean
  • 0.00% East-South-Asian
  • 0.00% Indian
  • 0.00% Indo-Iranian
  • 0.00% Indo-Tibetan
  • 0.00% Melanesian
  • 0.00% Mesoamerican
  • 0.00% Near_East
  • 0.00% North-Amerind
  • 0.00% North-Siberean
  • 0.00% Paleo-Siberian
  • 0.00% Samoedic
  • 0.00% South-America_Amerind
  • 0.00% West-Asian

MDLP Ancient Roots K17

  • 51.19% Ancestral_East_European_ANE
  • 28.36% West_European_HG
  • 10.29% Caucasian-Basal
  • 7.22% Ancestral_Mediterranean_EEF
  • 1.61% Ancestral_Sami-Finnic
  • 0.29% Ancestral_West_Siberian
  • 0.27% Uralic
  • 0.16% Amerindian
  • 0.13% Ancestral_South_Indian
  • 0.11% Ancestral_North_Indian
  • 0.08% Ancestral_East_Siberian
  • 0.08% Melano-Austronesian
  • 0.06% African_Sub_Saharian
  • 0.04% Archaic_African
  • 0.04% Near-East-Basal
  • 0.04% South_East_Asian
  • 0.01% Circumpolar

MDLP Ancient Roots K18

  • 43.66% North_West_European
  • 25.57% East_European
  • 16.83% Caucasian
  • 12.09% Sami-Finnic
  • 0.87% Mediterranean
  • 0.85% Archaic_African
  • 0.11% Volga-Uralic
  • 0.00% Afroasiatic
  • 0.00% Amerindian
  • 0.00% Arctic
  • 0.00% East_African
  • 0.00% East_Siberian
  • 0.00% Melano-Austronesian
  • 0.00% Roma
  • 0.00% South_Central_Asian
  • 0.00% South_East_Asian
  • 0.00% South_Indian
  • 0.00% West_Siberian

MDLP K23b

  • 43.33% European_Hunters_Gatherers
  • 23.15% European_Early_Farmers
  • 16.11% Caucasian
  • 4.38% Near-East
  • 3.27% Austronesian
  • 2.61% North-African
  • 1.52% African-Pygmy
  • 1.31% Archaic-Human
  • 1.21% Archaic-African
  • 1.08% Subsaharian
  • 0.74% Ancestral-North-Eurasian
  • 0.62% Paleo-Siberian
  • 0.44% Ancestral-North-Indian
  • 0.11% East-African
  • 0.10% Austroloid
  • 0.01% South-East-Asian
  • 0.00% Altaiс
  • 0.00% Amerindian
  • 0.00% Ancestral-South-Indian
  • 0.00% Arctic
  • 0.00% East-Siberian
  • 0.00% Khoisan
  • 0.00% Melano-Polinesian
Posted in Uncategorized

Analyses of a fourth ancient English genome

Below are the results of analyses of ERS389798, the fourth of the five Iron Age and Anglo-Saxon samples from Hinxton, England.

The data indicate that ERS389798 was male. It can be inferred from the Y-SNP calls that he belonged to Y haplogroup R1b, and he may have belonged to R1b1a2a1a2c1g2-FGC3903/S5201/Y2890.

The mt-SNP calls show that ERS389798 belonged to mitochondrial haplogroup H1ag1.

ERS389798 had the ancestral allele of the SNP rs12203592 in the gene IRF4. The derived allele of this SNP is associated with lighter hair and eye color, and freckling.

He had the ancestral allele of the SNP rs1110400 in the gene MC1R. The derived allele of this SNP is associated with red hair.

He had the ancestral allele of the SNP rs1805007 in the gene MC1R. The derived allele is associated with red hair.

He had the ancestral allele of rs1805008 in MC1R. The derived allele of this SNP is also associated with red hair.

He had the ancestral allele of rs12913832 in HERC2. The derived allele is associated with blue eyes.

ERS389798 had 5.96% of the K12b Gedrosia component, which is a bit less than the 6.53% that ERS389796 had. He also had a bit less of the MDLP Iberian components than ERS389796 had.

globe4

  • 87.71% European
  • 6.39% Amerindian
  • 5.67% African
  • 0.23% Asian

globe10

  • 68.78% Atlantic_Baltic
  • 13.52% Southern
  • 7.11% West_Asian
  • 5.82% Neo_African
  • 2.81% South_Asian
  • 1.81% Australasian
  • 0.13% Amerindian
  • 0.02% Siberian
  • 0.00% East_Asian
  • 0.00% Palaeo_African

globe13

  • 47.15% North_European
  • 31.66% Mediterranean
  • 7.30% West_Asian
  • 3.86% East_African
  • 3.19% Southwest_Asian
  • 2.86% West_African
  • 1.76% Arctic
  • 1.51% Australasian
  • 0.71% South_Asian
  • 0.00% Amerindian
  • 0.00% East_Asian
  • 0.00% Palaeo_African
  • 0.00% Siberian

K7b

  • 64.34% Atlantic_Baltic
  • 16.13% Southern
  • 9.87% West_Asian
  • 6.01% African
  • 3.59% South_Asian
  • 0.06% Siberian
  • 0.01% East_Asian

K10a

  • 52.78% Atlantic_Baltic
  • 28.85% Mediterranean
  • 7.28% West_Asian
  • 5.74% Sub_Saharan
  • 3.07% South_Asian
  • 1.43% Red_Sea
  • 0.85% Siberian
  • 0.01% Southeast_Asian
  • 0.00% East_Asian
  • 0.00% Palaeoafrican

K12b

  • 39.04% North_European
  • 32.43% Atlantic_Med
  • 9.12% Caucasus
  • 5.96% Gedrosia
  • 3.54% Sub_Saharan
  • 2.90% South_Asian
  • 2.73% East_African
  • 2.63% Northwest_African
  • 1.63% Southwest_Asian
  • 0.02% Siberian
  • 0.00% East_Asian
  • 0.00% Southeast_Asian

dv3

  • 48.72% West_European
  • 23.25% Mediterranean
  • 9.04% East_European
  • 9.00% West_Asian
  • 3.85% Neo_African
  • 2.49% East_African
  • 1.52% Palaeo_African
  • 1.31% Northwest_African
  • 0.77% Northeast_Asian
  • 0.05% Southwest_Asian
  • 0.00% South_Asian
  • 0.00% Southeast_Asian

MDLP K=5

  • 36.55% Paleo-mediterranean
  • 34.70% West-Eurasian
  • 19.49% Caucasian
  • 4.94% South-Asian
  • 4.31% East-Eurasian

MDLP K=6

  • 37.11% West-Eurasian
  • 33.15% Paleo-Mediterranean
  • 18.18% Caucasian
  • 4.48% South-Asian
  • 4.29% East-Euroasian
  • 2.79% North-West-Eurasian

MDLP K=7

  • 37.39% West-Eurasian
  • 32.52% Paleo-Mediterranean
  • 18.08% Caucasian
  • 4.48% South-Central-Asian
  • 4.39% Altaic-Turkic
  • 2.50% Paleo-Scandinavian
  • 0.64% Volga-Uralic

MDLP K=8

  • 35.46% West-European
  • 23.99% East-European
  • 17.28% Caucasian
  • 13.95% Paleo-Mediterranean
  • 4.57% South-Central-Asian
  • 4.46% Altaic-Turkic
  • 0.15% Paleo-Scandinavian
  • 0.15% Volga-Finnic

MDLP K=9

  • 35.12% West-European
  • 22.88% East-European
  • 17.16% Caucasian
  • 14.30% Paleo-Mediterranean
  • 4.55% South-Central-Asian
  • 4.41% Altaic-Turkic
  • 1.32% Paleo-Balkanic
  • 0.15% Volga-Finnic
  • 0.11% Paleo-Scandinavian

MDLP K=10

  • 36.33% British
  • 14.39% Paleo-Mediterranean
  • 13.68% Iberian
  • 13.04% East-European
  • 11.89% Caucasian
  • 4.58% South-Central-Asian
  • 4.43% Altaic-Turkic
  • 1.38% Paleo-Balkanic
  • 0.25% Volga-Finnic
  • 0.03% Paleo-North-European

MDLP K=11

  • 36.19% Celto-Germanic
  • 14.12% Mediterranean
  • 12.98% Iberian
  • 12.65% East-European
  • 11.63% Caucasian
  • 4.34% South-Central-Asian
  • 3.73% Altaic-Turkic
  • 2.99% Uralic-Permic
  • 1.33% Paleo-Balkanic
  • 0.03% Paleo-North-European
  • 0.00% Volga-Uralic

MDLP K=12

  • 34.99% Celto-Germanic
  • 13.69% Paleo-Mediterranean
  • 12.75% Iberian
  • 11.52% East-European
  • 11.21% Caucasian
  • 4.32% South-Central Asian
  • 3.80% Balto-Finnic
  • 3.61% Alatic-Turkic
  • 2.87% Uralic-Permic
  • 1.24% Paleo-Balkanic
  • 0.00% Paleo-North-European
  • 0.00% Volga-Uralic

MDLP K=13

  • 22.06% Altaic
  • 16.81% Paleo-Mediterranean
  • 14.95% Celto-Germanic
  • 8.18% South-Central-Asian
  • 8.05% Iberian
  • 7.99% Mediterrean
  • 7.93% East-Mediterranean
  • 7.72% East-European
  • 4.35% Volga-Uralic
  • 1.96% Baltic-Finnic
  • 0.00% Caucasian
  • 0.00% Paleo-North-European
  • 0.00% Uralic-Permic

MDLP K=14

  • 32.03% Celto-Germanic
  • 15.73% Mediterranean
  • 11.15% Iberian
  • 10.89% East-Mediterranean
  • 10.16% Balto-Slavic
  • 5.19% Caucasian
  • 3.89% South-Central-Asian
  • 3.49% Balto-Finnic
  • 3.35% Altaic
  • 2.78% Uralic-Permic
  • 1.00% Paleo-Balkanic
  • 0.34% Paleo-Mediterranean
  • 0.00% Paleo-Scandinavian
  • 0.00% Volga-Finnic

MDLP K=15

  • 32.33% Celto-Germanic
  • 15.76% Balkanic-1
  • 11.03% Iberian
  • 10.73% East-Mediterranean
  • 10.33% Balto-Slavic
  • 5.00% Caucasian
  • 3.82% South-Central-Asian
  • 3.47% Balto-Finnic
  • 2.54% Uralic-Permic
  • 2.39% West-Altaic
  • 1.53% East-Altaic
  • 0.99% Balkanic-2
  • 0.08% West-Mediterranean
  • 0.00% Paleo-North-European
  • 0.00% Volga-Uralic

MDLP World-22

  • 45.42% North-East-European
  • 34.33% Atlantic_Mediterranean_Neolithic
  • 4.40% West-Asian
  • 3.91% Near_East
  • 3.58% Sub-Saharian
  • 2.99% Austronesian
  • 2.49% Samoedic
  • 1.55% Arctic-Amerind
  • 1.24% North-European-Mesolithic
  • 0.07% Melanesian
  • 0.01% North-Amerind
  • 0.00% East-Siberean
  • 0.00% East-South-Asian
  • 0.00% Indian
  • 0.00% Indo-Iranian
  • 0.00% Indo-Tibetan
  • 0.00% Mesoamerican
  • 0.00% North-Siberean
  • 0.00% Paleo-Siberian
  • 0.00% Pygmy
  • 0.00% South-African
  • 0.00% South-America_Amerind

MDLP Ancient Roots K17

  • 40.41% Ancestral_East_European_ANE
  • 22.12% West_European_HG
  • 15.85% Ancestral_Mediterranean_EEF
  • 9.29% Caucasian-Basal
  • 3.71% African_Sub_Saharian
  • 1.62% Archaic_African
  • 1.62% Near-East-Basal
  • 1.50% Melano-Austronesian
  • 1.31% Ancestral_North_Indian
  • 0.76% Ancestral_South_Indian
  • 0.68% Ancestral_West_Siberian
  • 0.47% Circumpolar
  • 0.22% Ancestral_Sami-Finnic
  • 0.18% Uralic
  • 0.11% Amerindian
  • 0.08% Ancestral_East_Siberian
  • 0.07% South_East_Asian

MDLP Ancient Roots K18

  • 35.35% North_West_European
  • 25.85% East_European
  • 15.03% Caucasian
  • 10.24% Mediterranean
  • 5.58% East_African
  • 2.87% South_Indian
  • 2.78% Arctic
  • 1.08% Afroasiatic
  • 0.88% Melano-Austronesian
  • 0.25% Archaic_African
  • 0.05% South_Central_Asian
  • 0.03% West_Siberian
  • 0.00% Amerindian
  • 0.00% East_Siberian
  • 0.00% Roma
  • 0.00% Sami-Finnic
  • 0.00% South_East_Asian
  • 0.00% Volga-Uralic

MDLP K23b

  • 32.46% European_Hunters_Gatherers
  • 31.80% European_Early_Farmers
  • 13.98% Caucasian
  • 6.77% Ancestral-North-Indian
  • 6.56% Ancestral-North-Eurasian
  • 4.69% Subsaharian
  • 1.35% North-African
  • 0.97% East-African
  • 0.54% Arctic
  • 0.29% Ancestral-South-Indian
  • 0.22% Melano-Polinesian
  • 0.16% Austroloid
  • 0.09% Near-East
  • 0.07% Paleo-Siberian
  • 0.01% African-Pygmy
  • 0.01% Amerindian
  • 0.01% Archaic-Human
  • 0.01% East-Siberian
  • 0.01% South-East-Asian
  • 0.00% Altaiс
  • 0.00% Archaic-African
  • 0.00% Austronesian
  • 0.00% Khoisan
Posted in Uncategorized

Analyses of a third ancient English genome

Below are the results of analyses of ERS389797, the third of the five Iron Age and Anglo-Saxon samples from Hinxton, England.

The data indicate that ERS389797 was female. The mt-SNP calls show that she belonged to mitochondrial haplogroup K1a4a1a2.

ERS389797 had 15.23% of the K12b Gedrosia component, which is more than twice as much as ERS389796 had. It is also significantly more than the 10.6% of the Gedrosia component found in England today. We can be certain that ERS389797 belonged to a group of R1b people.

ERS389797 also had about twice as much of the MDLP Iberian components as ERS389796. The association between R1b, the Gedrosia component, and the Iberian components supports my belief that R1b people inhabited an Iberian refuge for much of the Upper Paleolithic, before spreading north and east during the Mesolithic and Neolithic.

globe4

  • 90.33% European
  • 5.90% African
  • 3.76% Amerindian
  • 0.01% Asian

globe10

  • 67.27% Atlantic_Baltic
  • 13.26% West_Asian
  • 12.70% Southern
  • 3.10% Neo_African
  • 2.66% Palaeo_African
  • 1.00% South_Asian
  • 0.00% Amerindian
  • 0.00% Australasian
  • 0.00% East_Asian
  • 0.00% Siberian

globe13

  • 44.32% North_European
  • 34.24% Mediterranean
  • 13.25% West_Asian
  • 2.17% West_African
  • 2.16% Palaeo_African
  • 1.73% East_African
  • 1.15% Arctic
  • 0.98% Southwest_Asian
  • 0.00% Amerindian
  • 0.00% Australasian
  • 0.00% East_Asian
  • 0.00% Siberian
  • 0.00% South_Asian

K7b

  • 64.24% Atlantic_Baltic
  • 13.93% West_Asian
  • 13.88% Southern
  • 6.70% African
  • 1.11% South_Asian
  • 0.13% East_Asian
  • 0.01% Siberian

K10a

  • 53.71% Atlantic_Baltic
  • 29.63% Mediterranean
  • 9.15% West_Asian
  • 4.04% Sub_Saharan
  • 2.30% Palaeoafrican
  • 0.91% East_Asian
  • 0.17% South_Asian
  • 0.09% Red_Sea
  • 0.00% Siberian
  • 0.00% Southeast_Asian

K12b

  • 42.03% Atlantic_Med
  • 29.58% North_European
  • 15.23% Gedrosia
  • 3.96% Sub_Saharan
  • 3.42% Caucasus
  • 2.82% East_African
  • 2.43% Northwest_African
  • 0.52% East_Asian
  • 0.00% Siberian
  • 0.00% South_Asian
  • 0.00% Southeast_Asian
  • 0.00% Southwest_Asian

dv3

  • 48.98% West_European
  • 23.37% Mediterranean
  • 10.98% West_Asian
  • 5.25% Northwest_African
  • 4.02% Neo_African
  • 3.16% East_European
  • 2.80% East_African
  • 1.32% South_Asian
  • 0.13% Northeast_Asian
  • 0.00% Palaeo_African
  • 0.00% Southeast_Asian
  • 0.00% Southwest_Asian

MDLP K=5

  • 40.46% Paleo-mediterranean
  • 36.28% West-Eurasian
  • 10.39% Caucasian
  • 6.47% East-Eurasian
  • 6.40% South-Asian

MDLP K=6

  • 38.50% Paleo-Mediterranean
  • 33.91% West-Eurasian
  • 8.93% Caucasian
  • 8.15% North-West-Eurasian
  • 6.19% South-Asian
  • 4.32% East-Euroasian

MDLP K=7

  • 38.09% Paleo-Mediterranean
  • 33.83% West-Eurasian
  • 8.52% Caucasian
  • 6.00% South-Central-Asian
  • 4.95% Paleo-Scandinavian
  • 4.61% Volga-Uralic
  • 4.01% Altaic-Turkic

MDLP K=8

  • 52.26% West-European
  • 14.70% Caucasian
  • 12.21% East-European
  • 6.73% South-Central-Asian
  • 5.78% Paleo-Mediterranean
  • 4.24% Volga-Finnic
  • 3.51% Altaic-Turkic
  • 0.57% Paleo-Scandinavian

MDLP K=9

  • 52.27% West-European
  • 14.43% Caucasian
  • 10.51% East-European
  • 6.08% South-Central-Asian
  • 4.87% Paleo-Mediterranean
  • 4.10% Volga-Finnic
  • 3.76% Altaic-Turkic
  • 3.57% Paleo-Balkanic
  • 0.42% Paleo-Scandinavian

MDLP K=10

  • 38.80% British
  • 32.24% Iberian
  • 9.92% Caucasian
  • 5.61% South-Central-Asian
  • 4.44% Volga-Finnic
  • 4.11% Altaic-Turkic
  • 3.54% Paleo-Balkanic
  • 1.02% East-European
  • 0.30% Paleo-North-European
  • 0.00% Paleo-Mediterranean

MDLP K=11

  • 39.47% Celto-Germanic
  • 31.31% Iberian
  • 9.73% Caucasian
  • 6.19% Volga-Uralic
  • 5.68% South-Central-Asian
  • 3.46% Paleo-Balkanic
  • 3.27% Altaic-Turkic
  • 0.67% Paleo-North-European
  • 0.22% East-European
  • 0.00% Mediterranean
  • 0.00% Uralic-Permic

MDLP K=12

  • 38.93% Celto-Germanic
  • 30.87% Iberian
  • 8.53% Caucasian
  • 6.04% Volga-Uralic
  • 5.59% South-Central Asian
  • 3.52% Paleo-Balkanic
  • 3.37% Alatic-Turkic
  • 2.00% East-European
  • 1.15% Paleo-North-European
  • 0.00% Balto-Finnic
  • 0.00% Paleo-Mediterranean
  • 0.00% Uralic-Permic

MDLP K=13

  • 22.60% Paleo-Mediterranean
  • 17.42% Altaic
  • 14.36% Celto-Germanic
  • 13.30% South-Central-Asian
  • 9.16% Mediterrean
  • 4.69% Volga-Uralic
  • 4.34% Baltic-Finnic
  • 3.66% Paleo-North-European
  • 3.13% Uralic-Permic
  • 3.08% Iberian
  • 2.21% East-European
  • 2.05% East-Mediterranean
  • 0.00% Caucasian

MDLP K=14

  • 33.30% Celto-Germanic
  • 25.04% Iberian
  • 14.52% East-Mediterranean
  • 6.33% Caucasian
  • 4.28% South-Central-Asian
  • 3.74% Altaic
  • 3.61% Balto-Slavic
  • 3.49% Volga-Finnic
  • 3.17% Paleo-Balkanic
  • 1.62% Paleo-Mediterranean
  • 0.89% Paleo-Scandinavian
  • 0.00% Balto-Finnic
  • 0.00% Mediterranean
  • 0.00% Uralic-Permic

MDLP K=15

  • 33.85% Celto-Germanic
  • 24.91% Iberian
  • 14.33% East-Mediterranean
  • 6.16% Caucasian
  • 4.76% West-Altaic
  • 4.11% Balto-Slavic
  • 3.35% South-Central-Asian
  • 3.27% Balkanic-2
  • 2.93% Volga-Uralic
  • 1.55% West-Mediterranean
  • 0.78% Paleo-North-European
  • 0.00% Balkanic-1
  • 0.00% Balto-Finnic
  • 0.00% East-Altaic
  • 0.00% Uralic-Permic

MDLP World-22

  • 43.33% North-East-European
  • 31.35% Atlantic_Mediterranean_Neolithic
  • 7.69% South-African
  • 7.51% North-European-Mesolithic
  • 7.49% Arctic-Amerind
  • 1.92% Near_East
  • 0.71% West-Asian
  • 0.00% Austronesian
  • 0.00% East-Siberean
  • 0.00% East-South-Asian
  • 0.00% Indian
  • 0.00% Indo-Iranian
  • 0.00% Indo-Tibetan
  • 0.00% Melanesian
  • 0.00% Mesoamerican
  • 0.00% North-Amerind
  • 0.00% North-Siberean
  • 0.00% Paleo-Siberian
  • 0.00% Pygmy
  • 0.00% Samoedic
  • 0.00% South-America_Amerind
  • 0.00% Sub-Saharian

MDLP Ancient Roots K17

  • 33.79% Ancestral_East_European_ANE
  • 21.53% West_European_HG
  • 13.90% Ancestral_Mediterranean_EEF
  • 9.06% Ancestral_North_Indian
  • 6.13% African_Sub_Saharian
  • 4.20% Caucasian-Basal
  • 3.29% Uralic
  • 2.71% Melano-Austronesian
  • 2.21% Archaic_African
  • 2.21% Near-East-Basal
  • 0.49% Circumpolar
  • 0.28% Ancestral_South_Indian
  • 0.12% Ancestral_West_Siberian
  • 0.05% Ancestral_Sami-Finnic
  • 0.02% Amerindian
  • 0.01% Ancestral_East_Siberian
  • 0.01% South_East_Asian

MDLP Ancient Roots K18

  • 37.47% North_West_European
  • 14.84% East_European
  • 14.54% South_Central_Asian
  • 10.01% Volga-Uralic
  • 9.64% Mediterranean
  • 4.84% East_African
  • 3.98% Archaic_African
  • 2.21% Caucasian
  • 1.97% Roma
  • 0.50% Melano-Austronesian
  • 0.00% Afroasiatic
  • 0.00% Amerindian
  • 0.00% Arctic
  • 0.00% East_Siberian
  • 0.00% Sami-Finnic
  • 0.00% South_East_Asian
  • 0.00% South_Indian
  • 0.00% West_Siberian

MDLP K23b

  • 38.37% European_Early_Farmers
  • 31.14% European_Hunters_Gatherers
  • 11.92% Caucasian
  • 9.62% Ancestral-North-Indian
  • 2.58% Subsaharian
  • 1.90% East-African
  • 1.76% African-Pygmy
  • 0.97% Austronesian
  • 0.63% Khoisan
  • 0.53% North-African
  • 0.24% East-Siberian
  • 0.21% Archaic-African
  • 0.08% Arctic
  • 0.02% Ancestral-North-Eurasian
  • 0.02% Ancestral-South-Indian
  • 0.01% Amerindian
  • 0.00% Altaiс
  • 0.00% Archaic-Human
  • 0.00% Austroloid
  • 0.00% Melano-Polinesian
  • 0.00% Near-East
  • 0.00% Paleo-Siberian
  • 0.00% South-East-Asian
Posted in Uncategorized

Analyses of a second ancient English genome

Below are the results of analyses of ERS389796, the second of the five Iron Age and Anglo-Saxon samples from Hinxton, England.

The data indicate that ERS389796 was female. The mt-SNP calls show that she belonged to mitochondrial haplogroup H2a2b1.

ERS389796 had the ancestral allele of the SNP rs1805005 in the gene MC1R. The derived allele of this SNP is associated with light blond hair and fair skin.

ERS389796 had 6.53% of the K12b Gedrosia component, which indicates that, unlike ERS389795, she had some admixture from R1b people.

ERS389796 had significantly more of the Iberian components in the MDLP calculators than ERS389795.

globe4

  • 86.40% European
  • 7.26% Amerindian
  • 6.34% African
  • 0.00% Asian

globe10

  • 80.46% Atlantic_Baltic
  • 6.20% Neo_African
  • 4.93% West_Asian
  • 4.11% Southern
  • 2.98% Australasian
  • 0.68% Amerindian
  • 0.64% Palaeo_African
  • 0.00% East_Asian
  • 0.00% Siberian
  • 0.00% South_Asian

globe13

  • 56.60% North_European
  • 29.55% Mediterranean
  • 5.04% West_African
  • 4.36% West_Asian
  • 2.69% Australasian
  • 1.25% East_African
  • 0.30% Palaeo_African
  • 0.21% Amerindian
  • 0.00% Arctic
  • 0.00% East_Asian
  • 0.00% Siberian
  • 0.00% South_Asian
  • 0.00% Southwest_Asian

K7b

  • 77.30% Atlantic_Baltic
  • 8.36% West_Asian
  • 7.55% Southern
  • 5.88% African
  • 0.91% South_Asian
  • 0.00% East_Asian
  • 0.00% Siberian

K10a

  • 62.83% Atlantic_Baltic
  • 25.64% Mediterranean
  • 5.56% Sub_Saharan
  • 4.38% West_Asian
  • 1.15% Palaeoafrican
  • 0.45% South_Asian
  • 0.00% East_Asian
  • 0.00% Red_Sea
  • 0.00% Siberian
  • 0.00% Southeast_Asian

K12b

  • 43.28% North_European
  • 37.61% Atlantic_Med
  • 6.63% Caucasus
  • 6.53% Gedrosia
  • 4.27% Sub_Saharan
  • 1.67% East_African
  • 0.02% South_Asian
  • 0.00% East_Asian
  • 0.00% Northwest_African
  • 0.00% Siberian
  • 0.00% Southeast_Asian
  • 0.00% Southwest_Asian

dv3

  • 61.87% West_European
  • 16.31% Mediterranean
  • 9.56% West_Asian
  • 6.34% East_African
  • 3.60% Palaeo_African
  • 1.35% East_European
  • 0.59% Neo_African
  • 0.37% Northeast_Asian
  • 0.00% Northwest_African
  • 0.00% South_Asian
  • 0.00% Southeast_Asian
  • 0.00% Southwest_Asian

MDLP K=5

  • 43.02% Paleo-mediterranean
  • 38.50% West-Eurasian
  • 13.62% Caucasian
  • 4.85% South-Asian
  • 0.00% East-Eurasian

MDLP K=6

  • 40.13% Paleo-Mediterranean
  • 37.12% West-Eurasian
  • 12.21% Caucasian
  • 6.30% North-West-Eurasian
  • 4.25% South-Asian
  • 0.00% East-Euroasian

MDLP K=7

  • 39.30% Paleo-Mediterranean
  • 38.52% West-Eurasian
  • 11.93% Caucasian
  • 4.68% South-Central-Asian
  • 3.28% Paleo-Scandinavian
  • 2.28% Volga-Uralic
  • 0.00% Altaic-Turkic

MDLP K=8

  • 42.16% West-European
  • 24.05% East-European
  • 14.14% Caucasian
  • 13.22% Paleo-Mediterranean
  • 4.30% South-Central-Asian
  • 1.53% Volga-Finnic
  • 0.61% Paleo-Scandinavian
  • 0.00% Altaic-Turkic

MDLP K=9

  • 41.01% West-European
  • 23.41% East-European
  • 15.06% Paleo-Mediterranean
  • 13.90% Caucasian
  • 4.42% South-Central-Asian
  • 1.51% Volga-Finnic
  • 0.69% Paleo-Scandinavian
  • 0.00% Altaic-Turkic
  • 0.00% Paleo-Balkanic

MDLP K=10

  • 41.00% British
  • 17.14% Iberian
  • 15.50% Paleo-Mediterranean
  • 12.61% East-European
  • 7.49% Caucasian
  • 4.20% South-Central-Asian
  • 1.45% Volga-Finnic
  • 0.61% Paleo-North-European
  • 0.00% Altaic-Turkic
  • 0.00% Paleo-Balkanic

MDLP K=11

  • 40.48% Celto-Germanic
  • 16.02% Iberian
  • 15.55% Mediterranean
  • 11.02% East-European
  • 6.96% Caucasian
  • 6.72% Volga-Uralic
  • 3.25% South-Central-Asian
  • 0.01% Paleo-North-European
  • 0.00% Altaic-Turkic
  • 0.00% Paleo-Balkanic
  • 0.00% Uralic-Permic

MDLP K=12

  • 40.53% Celto-Germanic
  • 15.52% Iberian
  • 15.21% Paleo-Mediterranean
  • 11.27% East-European
  • 6.69% Volga-Uralic
  • 6.21% Caucasian
  • 2.93% South-Central Asian
  • 1.63% Paleo-North-European
  • 0.01% Balto-Finnic
  • 0.00% Alatic-Turkic
  • 0.00% Paleo-Balkanic
  • 0.00% Uralic-Permic

MDLP K=13

  • 22.76% Mediterrean
  • 17.46% Paleo-Mediterranean
  • 15.31% Altaic
  • 12.91% Baltic-Finnic
  • 12.47% East-Mediterranean
  • 12.44% Volga-Uralic
  • 6.14% South-Central-Asian
  • 0.38% Uralic-Permic
  • 0.14% Caucasian
  • 0.00% Celto-Germanic
  • 0.00% East-European
  • 0.00% Iberian
  • 0.00% Paleo-North-European

MDLP K=14

  • 36.99% Celto-Germanic
  • 12.17% Paleo-Mediterranean
  • 12.02% Iberian
  • 10.69% Balto-Slavic
  • 10.13% Mediterranean
  • 6.77% Caucasian
  • 6.47% Volga-Finnic
  • 2.51% South-Central-Asian
  • 1.44% Paleo-Scandinavian
  • 0.81% East-Mediterranean
  • 0.00% Altaic
  • 0.00% Balto-Finnic
  • 0.00% Paleo-Balkanic
  • 0.00% Uralic-Permic

MDLP K=15

  • 37.26% Celto-Germanic
  • 11.73% Iberian
  • 11.61% West-Mediterranean
  • 10.85% Balto-Slavic
  • 10.24% Balkanic-1
  • 6.67% Caucasian
  • 6.63% Volga-Uralic
  • 2.61% South-Central-Asian
  • 1.45% Paleo-North-European
  • 0.95% East-Mediterranean
  • 0.00% Balkanic-2
  • 0.00% Balto-Finnic
  • 0.00% East-Altaic
  • 0.00% Uralic-Permic
  • 0.00% West-Altaic

MDLP World-22

  • 46.47% North-East-European
  • 28.36% Atlantic_Mediterranean_Neolithic
  • 9.73% West-Asian
  • 3.98% North-European-Mesolithic
  • 3.42% Sub-Saharian
  • 3.09% Melanesian
  • 2.28% North-Amerind
  • 2.11% Indian
  • 0.56% Paleo-Siberian
  • 0.01% Near_East
  • 0.00% Arctic-Amerind
  • 0.00% Austronesian
  • 0.00% East-Siberean
  • 0.00% East-South-Asian
  • 0.00% Indo-Iranian
  • 0.00% Indo-Tibetan
  • 0.00% Mesoamerican
  • 0.00% North-Siberean
  • 0.00% Pygmy
  • 0.00% Samoedic
  • 0.00% South-African
  • 0.00% South-America_Amerind

MDLP Ancient Roots K17

  • 39.45% Ancestral_East_European_ANE
  • 25.93% West_European_HG
  • 14.22% Ancestral_Mediterranean_EEF
  • 5.41% Caucasian-Basal
  • 3.69% African_Sub_Saharian
  • 2.95% Circumpolar
  • 2.56% Melano-Austronesian
  • 1.81% Ancestral_North_Indian
  • 1.55% Uralic
  • 1.08% Amerindian
  • 0.79% Ancestral_Sami-Finnic
  • 0.28% Ancestral_South_Indian
  • 0.17% Ancestral_West_Siberian
  • 0.05% Ancestral_East_Siberian
  • 0.03% Archaic_African
  • 0.03% Near-East-Basal
  • 0.01% South_East_Asian

MDLP Ancient Roots K18

  • 42.31% North_West_European
  • 18.62% East_European
  • 8.99% Mediterranean
  • 7.40% Caucasian
  • 4.67% South_Central_Asian
  • 4.36% Volga-Uralic
  • 3.52% Melano-Austronesian
  • 3.27% East_African
  • 2.72% Arctic
  • 2.05% Amerindian
  • 1.11% Archaic_African
  • 0.95% Sami-Finnic
  • 0.01% Roma
  • 0.00% Afroasiatic
  • 0.00% East_Siberian
  • 0.00% South_East_Asian
  • 0.00% South_Indian
  • 0.00% West_Siberian

MDLP K23b

  • 30.23% European_Hunters_Gatherers
  • 27.84% European_Early_Farmers
  • 21.34% Caucasian
  • 9.39% Ancestral-North-Indian
  • 3.33% Archaic-African
  • 3.07% Ancestral-North-Eurasian
  • 1.96% Subsaharian
  • 1.48% Altaiс
  • 0.65% Austroloid
  • 0.38% East-Siberian
  • 0.21% Archaic-Human
  • 0.05% Austronesian
  • 0.04% Ancestral-South-Indian
  • 0.03% Near-East
  • 0.01% Paleo-Siberian
  • 0.00% African-Pygmy
  • 0.00% Amerindian
  • 0.00% Arctic
  • 0.00% East-African
  • 0.00% Khoisan
  • 0.00% Melano-Polinesian
  • 0.00% North-African
  • 0.00% South-East-Asian
Posted in Uncategorized

Analyses of an ancient English genome

Below are the results of analyses of the sample ERS389795. This sample is one of five Iron Age and Anglo-Saxon samples from Hinxton, England that are analyzed in a paper that has not yet been published, but whose abstract is here.

The data indicate that ERS389795 was male. The Y-SNP calls don’t show which Y haplogroup ERS389795 belonged to, but they do show that he didn’t belong to haplogroups E, G, I1, J, R1a1, or T1a.

The mt-SNP calls show that ERS389795 belonged to mitochondrial haplogroup K1a1.

ERS389795 only had 0.08% of the K12b Gedrosia component, which indicates that he didn’t belong to Y haplogroup R1b. The modern-day English have on average 10.6% of the Gedrosia component.

globe4

  • 85.44% European
  • 8.40% Amerindian
  • 4.29% African
  • 1.87% Asian

globe10

  • 72.39% Atlantic_Baltic
  • 10.51% Southern
  • 5.16% Neo_African
  • 5.07% West_Asian
  • 3.12% Siberian
  • 2.55% Amerindian
  • 0.97% Australasian
  • 0.20% South_Asian
  • 0.03% East_Asian
  • 0.00% Palaeo_African

globe13

  • 54.47% North_European
  • 24.52% Mediterranean
  • 6.60% Southwest_Asian
  • 4.46% West_African
  • 3.54% West_Asian
  • 2.74% Siberian
  • 2.55% Amerindian
  • 0.67% Australasian
  • 0.44% East_African
  • 0.00% Arctic
  • 0.00% East_Asian
  • 0.00% Palaeo_African
  • 0.00% South_Asian

K7b

  • 75.10% Atlantic_Baltic
  • 9.16% Southern
  • 6.64% West_Asian
  • 3.97% African
  • 3.48% Siberian
  • 1.64% East_Asian
  • 0.01% South_Asian

K10a

  • 62.51% Atlantic_Baltic
  • 22.84% Mediterranean
  • 3.57% Sub_Saharan
  • 3.43% West_Asian
  • 3.03% East_Asian
  • 2.19% Red_Sea
  • 2.02% Siberian
  • 0.25% South_Asian
  • 0.15% Palaeoafrican
  • 0.00% Southeast_Asian

K12b

  • 49.89% North_European
  • 30.08% Atlantic_Med
  • 9.78% Caucasus
  • 3.63% East_Asian
  • 3.19% Sub_Saharan
  • 1.31% Northwest_African
  • 1.16% Siberian
  • 0.79% East_African
  • 0.08% Gedrosia
  • 0.07% South_Asian
  • 0.00% Southeast_Asian
  • 0.00% Southwest_Asian

dv3

  • 41.46% West_European
  • 24.44% East_European
  • 17.31% Mediterranean
  • 5.55% Northwest_African
  • 3.17% South_Asian
  • 2.69% Palaeo_African
  • 1.70% West_Asian
  • 1.21% Northeast_Asian
  • 0.99% Southeast_Asian
  • 0.85% Southwest_Asian
  • 0.63% Neo_African
  • 0.00% East_African

MDLP K=5

  • 48.32% West-Eurasian
  • 34.64% Paleo-mediterranean
  • 7.27% East-Eurasian
  • 6.59% Caucasian
  • 3.17% South-Asian

MDLP K=6

  • 53.33% West-Eurasian
  • 27.98% Paleo-Mediterranean
  • 7.02% East-Euroasian
  • 5.17% Caucasian
  • 3.59% South-Asian
  • 2.92% North-West-Eurasian

MDLP K=7

  • 53.00% West-Eurasian
  • 27.23% Paleo-Mediterranean
  • 6.98% Altaic-Turkic
  • 5.04% Caucasian
  • 4.15% Paleo-Scandinavian
  • 3.59% South-Central-Asian
  • 0.02% Volga-Uralic

MDLP K=8

  • 45.18% East-European
  • 21.98% West-European
  • 17.98% Paleo-Mediterranean
  • 6.04% Altaic-Turkic
  • 4.24% Paleo-Scandinavian
  • 3.66% South-Central-Asian
  • 0.90% Caucasian
  • 0.01% Volga-Finnic

MDLP K=9

  • 44.19% East-European
  • 21.33% West-European
  • 17.61% Paleo-Mediterranean
  • 5.98% Altaic-Turkic
  • 4.24% Paleo-Scandinavian
  • 3.60% South-Central-Asian
  • 1.98% Paleo-Balkanic
  • 1.05% Caucasian
  • 0.02% Volga-Finnic

MDLP K=10

  • 35.25% East-European
  • 28.32% British
  • 19.17% Paleo-Mediterranean
  • 5.73% Altaic-Turkic
  • 4.50% Paleo-North-European
  • 3.31% South-Central-Asian
  • 1.97% Paleo-Balkanic
  • 1.71% Iberian
  • 0.02% Caucasian
  • 0.01% Volga-Finnic

MDLP K=11

  • 34.90% East-European
  • 27.42% Celto-Germanic
  • 19.08% Mediterranean
  • 5.13% Altaic-Turkic
  • 4.62% Paleo-North-European
  • 2.97% South-Central-Asian
  • 2.59% Uralic-Permic
  • 1.94% Paleo-Balkanic
  • 1.33% Iberian
  • 0.02% Caucasian
  • 0.00% Volga-Uralic

MDLP K=12

  • 26.46% Celto-Germanic
  • 22.97% East-European
  • 20.22% Balto-Finnic
  • 17.82% Paleo-Mediterranean
  • 3.76% Alatic-Turkic
  • 2.77% Uralic-Permic
  • 2.73% South-Central Asian
  • 1.73% Paleo-Balkanic
  • 0.85% Iberian
  • 0.68% Paleo-North-European
  • 0.01% Caucasian
  • 0.00% Volga-Uralic

MDLP K=13

  • 21.36% Altaic
  • 14.03% Celto-Germanic
  • 12.13% East-Mediterranean
  • 11.80% Mediterrean
  • 10.35% Baltic-Finnic
  • 9.67% Iberian
  • 8.70% Paleo-Mediterranean
  • 4.65% South-Central-Asian
  • 3.08% Uralic-Permic
  • 2.60% Paleo-North-European
  • 1.32% Caucasian
  • 0.29% East-European
  • 0.00% Volga-Uralic

MDLP K=14

  • 22.38% Celto-Germanic
  • 20.15% Balto-Slavic
  • 18.92% Balto-Finnic
  • 13.30% East-Mediterranean
  • 12.79% Paleo-Mediterranean
  • 4.07% Mediterranean
  • 3.51% Altaic
  • 2.22% Uralic-Permic
  • 1.32% Paleo-Balkanic
  • 1.01% South-Central-Asian
  • 0.33% Paleo-Scandinavian
  • 0.00% Caucasian
  • 0.00% Iberian
  • 0.00% Volga-Finnic

MDLP K=15

  • 22.46% Celto-Germanic
  • 20.23% Balto-Slavic
  • 18.88% Balto-Finnic
  • 13.40% East-Mediterranean
  • 12.52% West-Mediterranean
  • 3.88% Balkanic-1
  • 3.79% West-Altaic
  • 2.29% Uralic-Permic
  • 1.35% Balkanic-2
  • 0.95% South-Central-Asian
  • 0.25% Paleo-North-European
  • 0.00% Caucasian
  • 0.00% East-Altaic
  • 0.00% Iberian
  • 0.00% Volga-Uralic

MDLP World-22

  • 32.96% North-East-European
  • 29.61% Atlantic_Mediterranean_Neolithic
  • 14.30% North-European-Mesolithic
  • 6.27% Mesoamerican
  • 5.42% Indian
  • 4.48% Pygmy
  • 3.46% Near_East
  • 2.91% Indo-Iranian
  • 0.40% Indo-Tibetan
  • 0.13% South-African
  • 0.06% East-Siberean
  • 0.01% South-America_Amerind
  • 0.00% Arctic-Amerind
  • 0.00% Austronesian
  • 0.00% East-South-Asian
  • 0.00% Melanesian
  • 0.00% North-Amerind
  • 0.00% North-Siberean
  • 0.00% Paleo-Siberian
  • 0.00% Samoedic
  • 0.00% Sub-Saharian
  • 0.00% West-Asian

MDLP Ancient Roots K17

  • 45.66% Ancestral_East_European_ANE
  • 23.08% West_European_HG
  • 16.70% Ancestral_Mediterranean_EEF
  • 3.16% Caucasian-Basal
  • 2.29% Uralic
  • 2.22% Ancestral_East_Siberian
  • 1.81% Melano-Austronesian
  • 1.39% Ancestral_South_Indian
  • 1.31% African_Sub_Saharian
  • 0.73% Ancestral_North_Indian
  • 0.45% Archaic_African
  • 0.45% Near-East-Basal
  • 0.35% Ancestral_West_Siberian
  • 0.28% Circumpolar
  • 0.07% South_East_Asian
  • 0.05% Amerindian
  • 0.01% Ancestral_Sami-Finnic

MDLP Ancient Roots K18

  • 48.40% North_West_European
  • 20.94% East_European
  • 9.71% Afroasiatic
  • 4.84% East_Siberian
  • 3.74% Roma
  • 3.48% Mediterranean
  • 2.30% West_Siberian
  • 2.11% Volga-Uralic
  • 1.89% South_Central_Asian
  • 1.78% Archaic_African
  • 0.80% East_African
  • 0.01% Caucasian
  • 0.00% Amerindian
  • 0.00% Arctic
  • 0.00% Melano-Austronesian
  • 0.00% Sami-Finnic
  • 0.00% South_East_Asian
  • 0.00% South_Indian

MDLP K23b

  • 35.13% European_Hunters_Gatherers
  • 31.41% Caucasian
  • 19.44% European_Early_Farmers
  • 6.42% Ancestral-North-Eurasian
  • 2.41% Ancestral-North-Indian
  • 2.24% Archaic-Human
  • 1.29% African-Pygmy
  • 0.75% East-African
  • 0.49% Near-East
  • 0.22% East-Siberian
  • 0.11% Ancestral-South-Indian
  • 0.05% Archaic-African
  • 0.04% North-African
  • 0.00% Altaiс
  • 0.00% Amerindian
  • 0.00% Arctic
  • 0.00% Austroloid
  • 0.00% Austronesian
  • 0.00% Khoisan
  • 0.00% Melano-Polinesian
  • 0.00% Paleo-Siberian
  • 0.00% South-East-Asian
  • 0.00% Subsaharian
Posted in Uncategorized

Pigmentation SNP genotypes for Motala hunter-gatherers

Below are all of the available genotypes for the Motala hunter-gatherers for the pigmentation SNPs included in the 8-plex and HIrisPlex systems. The genotypes for Motala 12 were already published, so they are omitted here.

Motala 3 had two copies of the derived allele of rs12203592, which is associated with lighter hair and eye color, and freckling. Motala 12 and Loschbour also had two copies of the derived allele, while Stuttgart had two copies of the ancestral allele.

Motala 3 and 6 had two copies of the ancestral allele of rs12821256, the derived allele of which is associated with blond hair. Motala 12, Loschbour, Stuttgart, Ajvide 58, and Gökhem 2 and 4 also had two copies of the ancestral allele.

Motala 3 had two copies of the ancestral allele of rs1805006, the derived allele of which is associated with red hair and fair skin. Motala 12, Loschbour, Stuttgart, Ajvide 58, and Gökhem 2 also had two copies of the ancestral allele.

Motala 2 had two copies of the ancestral allele of rs1805008, the derived allele of which is also associated with red hair and fair skin. Motala 12, Loschbour, Stuttgart, Stora Förvar 11, Ajvide 58, and Gökhem 2 and 7 also had two copies of the ancestral allele.

Motala 3 had two copies of the ancestral allele of rs1800407, the derived allele of which is associated with green or hazel eyes. Motala 12, Loschbour, Stuttgart, Ajvide 58, and Gökhem 2 also had two copies of the ancestral allele.

Motala 2 had two copies of the derived allele of rs1426654. This SNP is located in the gene SLC24A5, and its derived allele is one of the two major Caucasoid depigmentation mutations. Motala 12, Stuttgart, Gökhem 2, Ötzi, and Afontova Gora 2 also had two copies of the derived allele, while Loschbour, Ajvide 58, La Braña 1, and Mal’ta 1 had two copies of the ancestral allele.

Motala 4 had two copies of the ancestral allele of rs1393350, the derived allele of which is associated with blond hair and blue eyes. Motala 12, Loschbour, Stuttgart, Ajvide 52 and 58, and Gökhem 2 also had two copies of the ancestral allele.

Gene     SNP         Sample    Genotype
ASIP     rs6119471   Motala 1  CC
ASIP     rs6119471   Motala 3  CC
EXOC2    rs4959270   Motala 1  AA
IRF4     rs12203592  Motala 3  TT
KITLG    rs12821256  Motala 3  TT
KITLG    rs12821256  Motala 6  TT
MC1R     rs1805006   Motala 3  CC
MC1R     rs1805008   Motala 2  CC
MC1R     rs885479    Motala 2  GG
OCA2     rs1545397   Motala 1  AA
OCA2     rs1800407   Motala 3  CC
SLC24A5  rs1426654   Motala 2  AA
SLC45A2  rs28777     Motala 1  AA
TYR      rs1393350   Motala 4  GG
Posted in Uncategorized

mt-SNP calls for Motala 3

The mt-SNP calls for Motala 3 are here.

The published mitochondrial haplogroup for Motala 3 was U5a1, but the calls show that it was U2e1.

Posted in Uncategorized
Follow

Get every new post delivered to your Inbox.